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  5. Solyc04g082810

Solyc04g082810


Description : AT hook motif DNA-binding family protein (AHRD V3.3 *** A0A0K9NWT4_ZOSMR)


Gene families : OG_42_0000350 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g082810
Cluster HCCA clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Glyma.14G028600 No alias Predicted AT-hook DNA-binding family protein 0.05 Orthogroups_2024-Update
LOC_Os01g72450 No alias DNA binding protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g50030 No alias DNA binding protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g22100 No alias DNA binding protein, putative, expressed 0.02 Orthogroups_2024-Update
Solyc07g056300 No alias AT hook motif DNA-binding family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc09g089620 No alias AT hook motif DNA-binding family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen01g037230 No alias Domain of unknown function (DUF296) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
InterPro domains Description Start Stop
IPR005175 PPC_dom 58 168
No external refs found!