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  5. Solyc04g082960

Solyc04g082960


No description available


Gene families : OG_42_0000559 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g082960
Cluster HCCA clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
A4A49_12738 No alias hypothetical protein 0.03 Orthogroups_2024-Update
A4A49_26166 No alias hypothetical protein 0.05 Orthogroups_2024-Update
A4A49_33149 No alias hypothetical protein 0.04 Orthogroups_2024-Update
Brara.B02275.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.D01410.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Glyma.01G180500 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.11G121900 No alias Function unknown 0.04 Orthogroups_2024-Update
Glyma.12G046800 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.16G143400 No alias Function unknown 0.1 Orthogroups_2024-Update
HORVU2Hr1G061800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G074030.1 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_10001015g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_10238024g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_6390114g0010 No alias (at5g66580 : 82.4) unknown protein; FUNCTIONS IN:... 0.04 Orthogroups_2024-Update
MA_82882g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.005G259100 No alias Function unknown 0.04 Orthogroups_2024-Update
Potri.009G110600 No alias Function unknown 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!