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  5. Solyc05g005160

Solyc05g005160


Description : ATP-citrate synthase, putative (AHRD V3.3 *** B9SHC9_RICCO)


Gene families : OG_42_0002348 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002348_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g005160
Cluster HCCA clusters: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
Cre05.g241850 No alias ATP-citrate lyase A-1 0.01 Orthogroups_2024-Update
Glyma.15G267000 No alias ATP-citrate lyase A-1 0.03 Orthogroups_2024-Update
Mp5g21210.1 No alias alpha chain of ATP-dependent citrate lyase complex 0.03 Orthogroups_2024-Update
PSME_00046411-RA No alias (at1g09430 : 226.0) Encodes subunit A of the heteromeric... 0.01 Orthogroups_2024-Update
Potri.013G004400 No alias ATP-citrate lyase A-3 0.03 Orthogroups_2024-Update
Pp1s63_54V6 No alias at1g09430 f19j9_9 0.04 Orthogroups_2024-Update
Seita.3G332700.1 No alias subunit alpha of ATP-dependent citrate lyase complex 0.03 Orthogroups_2024-Update
Sobic.005G222200.1 No alias subunit alpha of ATP-dependent citrate lyase complex 0.03 Orthogroups_2024-Update
Sopen05g001170 No alias ATP-grasp domain 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Predicted GO
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
MF GO:0004668 protein-arginine deiminase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0009445 putrescine metabolic process IEP Predicted GO
BP GO:0009446 putrescine biosynthetic process IEP Predicted GO
BP GO:0015936 coenzyme A metabolic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013650 ATP-grasp_succ-CoA_synth-type 6 203
IPR032263 Citrate-bd 241 417
No external refs found!