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  5. evm.model.tig00000523.37

evm.model.tig00000523.37


Description : (at5g52820 : 177.0) WD-40 repeat family protein / notchless protein, putative; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), NLE (InterPro:IPR012972), WD40 repeat (InterPro:IPR001680), G-protein, beta subunit (InterPro:IPR001632), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p25387|gblp_chlre : 143.0) Guanine nucleotide-binding protein subunit beta-like protein - Chlamydomonas reinhardtii & (reliability: 354.0) & (original description: no original description)


Gene families : OG_42_0003601 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003601_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00000523.37
Cluster HCCA clusters: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
evm.model.tig00000042.157 No alias (at5g52820 : 149.0) WD-40 repeat family protein /... 0.02 Orthogroups_2024-Update
evm.model.tig00000190.50 No alias (at5g52820 : 173.0) WD-40 repeat family protein /... 0.03 Orthogroups_2024-Update
evm.model.tig00001038.28 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004055 argininosuccinate synthase activity IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006012 galactose metabolic process IEP Predicted GO
BP GO:0006525 arginine metabolic process IEP Predicted GO
BP GO:0006526 arginine biosynthetic process IEP Predicted GO
MF GO:0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001660 SAM 959 1018
IPR001680 WD40_repeat 1689 1716
IPR001680 WD40_repeat 2225 2257
IPR001680 WD40_repeat 2057 2092
IPR001680 WD40_repeat 2294 2319
IPR001680 WD40_repeat 1849 1884
IPR001680 WD40_repeat 1806 1842
IPR001680 WD40_repeat 2099 2134
IPR001680 WD40_repeat 2183 2218
IPR001680 WD40_repeat 1734 1762
IPR001680 WD40_repeat 2015 2050
IPR001680 WD40_repeat 2141 2176
IPR001680 WD40_repeat 1976 2008
IPR001680 WD40_repeat 2262 2293
No external refs found!