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  5. Solyc05g005790

Solyc05g005790


Description : Ring finger protein, putative (AHRD V3.3 *** B9S4M2_RICCO)


Gene families : OG_42_0000883 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000883_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g005790
Cluster HCCA clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
Brara.G00119.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
LOC_Os06g12680 No alias RING-H2 finger protein, putative, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 128 171
No external refs found!