Description : (at1g54080 : 83.6) oligouridylate-binding protein 1A (UBP1A); FUNCTIONS IN: mRNA 3'-UTR binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT3G14100.1); Has 22193 Blast hits to 15481 proteins in 722 species: Archae - 0; Bacteria - 1057; Metazoa - 11734; Fungi - 2918; Plants - 4318; Viruses - 0; Other Eukaryotes - 2166 (source: NCBI BLink). & (reliability: 167.2) & (original description: no original description)
Gene families : OG_42_0001825 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001825_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Cyanophora release: evm.model.tig00000670.26 | |
Cluster | HCCA clusters: Cluster_100 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005575 | cellular_component | IEP | Predicted GO |
CC | GO:0009521 | photosystem | IEP | Predicted GO |
CC | GO:0009522 | photosystem I | IEP | Predicted GO |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Predicted GO |
BP | GO:0010109 | regulation of photosynthesis | IEP | Predicted GO |
BP | GO:0010207 | photosystem II assembly | IEP | Predicted GO |
MF | GO:0010242 | oxygen evolving activity | IEP | Predicted GO |
BP | GO:0015979 | photosynthesis | IEP | Predicted GO |
MF | GO:0016491 | oxidoreductase activity | IEP | Predicted GO |
MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | Predicted GO |
MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Predicted GO |
CC | GO:0030076 | light-harvesting complex | IEP | Predicted GO |
CC | GO:0030089 | phycobilisome | IEP | Predicted GO |
BP | GO:0030258 | lipid modification | IEP | Predicted GO |
BP | GO:0030259 | lipid glycosylation | IEP | Predicted GO |
CC | GO:0032991 | protein-containing complex | IEP | Predicted GO |
BP | GO:0042548 | regulation of photosynthesis, light reaction | IEP | Predicted GO |
BP | GO:0042549 | photosystem II stabilization | IEP | Predicted GO |
BP | GO:0043467 | regulation of generation of precursor metabolites and energy | IEP | Predicted GO |
CC | GO:0044424 | intracellular part | IEP | Predicted GO |
CC | GO:0044425 | membrane part | IEP | Predicted GO |
CC | GO:0044436 | thylakoid part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
CC | GO:0098796 | membrane protein complex | IEP | Predicted GO |
CC | GO:1990204 | oxidoreductase complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000504 | RRM_dom | 19 | 88 |
No external refs found! |