Solyc05g006810


Description : FAD/NAD(P)-binding oxidoreductase family protein (AHRD V3.3 *** AT1G24340.1)


Gene families : OG_42_0006915 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006915_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g006810
Cluster HCCA clusters: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G088980.33 No alias demethoxyubiquinone hydroxylase 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0071949 FAD binding IEA InterProScan predictions
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004555 alpha,alpha-trehalase activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
MF GO:0015927 trehalase activity IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR002938 FAD-bd 50 421
No external refs found!