1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc05g006860

Solyc05g006860


Description : Thioredoxin family protein (AHRD V3.3 *** B9IJS4_POPTR)


Gene families : OG_42_0000297 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g006860
Cluster HCCA clusters: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
77812 No alias thioredoxin F-type 1 0.03 Orthogroups_2024-Update
At1g59730 No alias Thioredoxin [Source:UniProtKB/TrEMBL;Acc:A0A178WRN3] 0.03 Orthogroups_2024-Update
Brara.K01536.1 No alias H-type thioredoxin *(Trx-H) 0.02 Orthogroups_2024-Update
Cre09.g391900 No alias Thioredoxin superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G215900 No alias thioredoxin H-type 9 0.03 Orthogroups_2024-Update
Kfl00573_0030 kfl00573_0030_v1.1 (at3g17880 : 93.6) Encodes a thioredoxin-like disulfide... 0.02 Orthogroups_2024-Update
Pp1s21_318V6 No alias thioredoxin h 0.02 Orthogroups_2024-Update
Seita.2G061900.1 No alias protein-S-nitrosothiol reductase *(TRX5) & H-type... 0.03 Orthogroups_2024-Update
Seita.9G051600.1 No alias H-type thioredoxin *(Trx-H) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0045454 cell redox homeostasis IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0016836 hydro-lyase activity IEP Predicted GO
BP GO:0044030 regulation of DNA methylation IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 137 203
IPR013766 Thioredoxin_domain 40 130
No external refs found!