1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. evm.model.tig00000789.37

evm.model.tig00000789.37


Description : (at3g02530 : 621.0) TCP-1/cpn60 chaperonin family protein; FUNCTIONS IN: unfolded protein binding, ATP binding; INVOLVED IN: response to cadmium ion, response to zinc ion; LOCATED IN: membrane, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423), Chaperone, tailless complex polypeptide 1 (InterPro:IPR017998), T-complex protein 1, zeta subunit (InterPro:IPR012722), Chaperonin TCP-1, conserved site (InterPro:IPR002194); BEST Arabidopsis thaliana protein match is: TCP-1/cpn60 chaperonin family protein (TAIR:AT5G16070.1); Has 18475 Blast hits to 17833 proteins in 3650 species: Archae - 805; Bacteria - 8777; Metazoa - 2106; Fungi - 1471; Plants - 861; Viruses - 0; Other Eukaryotes - 4455 (source: NCBI BLink). & (p54411|tcpe2_avesa : 169.0) T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) (TCP-K36) - Avena sativa (Oat) & (reliability: 1242.0) & (original description: no original description)


Gene families : OG_42_0004744 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004744_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00000789.37
Cluster HCCA clusters: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
At3g02530 No alias T-complex protein 1 subunit zeta 1... 0.01 Orthogroups_2024-Update
Bradi3g04130 No alias TCP-1/cpn60 chaperonin family protein 0.04 Orthogroups_2024-Update
Brara.E03569.1 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex 0.02 Orthogroups_2024-Update
Cre09.g397200 No alias TCP-1/cpn60 chaperonin family protein 0.09 Orthogroups_2024-Update
Glyma.18G298100 No alias TCP-1/cpn60 chaperonin family protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G091690.4 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex 0.03 Orthogroups_2024-Update
Kfl00177_0050 kfl00177_0050_v1.1 (at3g02530 : 867.0) TCP-1/cpn60 chaperonin family... 0.04 Orthogroups_2024-Update
MA_8438g0020 No alias (at3g02530 : 563.0) TCP-1/cpn60 chaperonin family... 0.05 Orthogroups_2024-Update
Mp8g07530.1 No alias CCT6 subunit zeta of CCT chaperonin folding complex 0.05 Orthogroups_2024-Update
Seita.3G039600.1 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex 0.04 Orthogroups_2024-Update
Sobic.002G423500.1 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex 0.03 Orthogroups_2024-Update
Solyc02g063090 No alias T-complex protein 1 subunit zeta 1 (AHRD V3.3 *** TCPZA_ARATH) 0.04 Orthogroups_2024-Update
Solyc02g085790 No alias T-complex protein 1 subunit zeta 1 (AHRD V3.3 *** TCPZA_ARATH) 0.01 Orthogroups_2024-Update
Sopen02g014170 No alias TCP-1/cpn60 chaperonin family 0.02 Orthogroups_2024-Update
Sopen02g030480 No alias TCP-1/cpn60 chaperonin family 0.03 Orthogroups_2024-Update
evm.model.contig_827.1 No alias (at5g16070 : 650.0) TCP-1/cpn60 chaperonin family... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP Predicted GO
CC GO:0000502 proteasome complex IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
MF GO:0004813 alanine-tRNA ligase activity IEP Predicted GO
MF GO:0005047 signal recognition particle binding IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0005785 signal recognition particle receptor complex IEP Predicted GO
BP GO:0006419 alanyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0007155 cell adhesion IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
BP GO:0009894 regulation of catabolic process IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0019905 syntaxin binding IEP Predicted GO
BP GO:0022610 biological adhesion IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
BP GO:0042176 regulation of protein catabolic process IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
CC GO:1905369 endopeptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 65 350
IPR002423 Cpn60/TCP-1 353 523
No external refs found!