1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc05g007420

Solyc05g007420


Description : TCP transcription factor 23


Gene families : OG_42_0000261 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g007420
Cluster HCCA clusters: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
404061 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
AC199782.5_FG003 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update
At2g45680 No alias Transcription factor TCP9... 0.03 Orthogroups_2024-Update
Glyma.17G099100 No alias TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.03 Orthogroups_2024-Update
HORVU6Hr1G075650.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g69980 No alias TCP family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_16752g0010 No alias "(at3g47620 : 145.0) Encodes a transcription factor... 0.02 Orthogroups_2024-Update
Potri.004G222100 No alias TCP family transcription factor 0.02 Orthogroups_2024-Update
Seita.7G174000.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Solyc02g094290 No alias TCP transcription factor 27 0.04 Orthogroups_2024-Update
Solyc06g065190 No alias TCP transcription factor 13 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR005333 Transcription_factor_TCP 88 248
No external refs found!