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  5. Solyc05g008300

Solyc05g008300


Description : Heavy metal transport/detoxification superfamily protein (AHRD V3.3 *-* AT1G23000.2)


Gene families : OG_42_0000041 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g008300
Cluster HCCA clusters: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
At1g66240 No alias homolog of anti-oxidant 1 [Source:TAIR;Acc:AT1G66240] 0.02 Orthogroups_2024-Update
At5g66110 No alias Heavy metal-associated isoprenylated plant protein 27... 0.03 Orthogroups_2024-Update
Brara.B00797.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G029270.2 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00020227-RA No alias (at5g27690 : 103.0) Heavy metal transport/detoxification... 0.03 Orthogroups_2024-Update
Potri.015G144300 No alias Heavy metal transport/detoxification superfamily protein 0.02 Orthogroups_2024-Update
Sobic.001G374400.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
InterPro domains Description Start Stop
IPR006121 HMA_dom 17 70
No external refs found!