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  5. evm.model.tig00000900.29

evm.model.tig00000900.29


Description : (at1g55350 : 167.0) Similar to maize DEK1, a gene encoding a membrane protein of the calpain gene superfamily required for aleurone cell development in the endosperm of maize grains. A key component of the embryonic L1 cell-layer specification pathway.; DEFECTIVE KERNEL 1 (DEK1); FUNCTIONS IN: cysteine-type endopeptidase activity, calcium-dependent cysteine-type endopeptidase activity; INVOLVED IN: cell fate specification, embryo development ending in seed dormancy; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase C2, calpain, domain III (InterPro:IPR022683), Peptidase C2, calpain, large subunit, domain III (InterPro:IPR022682), Peptidase, cysteine peptidase active site (InterPro:IPR000169), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Peptidase C2, calpain, catalytic domain (InterPro:IPR001300), Peptidase C2, calpain family (InterPro:IPR022684). & (reliability: 334.0) & (original description: no original description)


Gene families : OG_42_0004065 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004065_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00000900.29
Cluster HCCA clusters: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
Cre17.g728300 No alias calpain-type cysteine protease family 0.02 Orthogroups_2024-Update
Seita.9G434900.1 No alias C2-class (Phytocalpain) calcium-activated protease 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
BP GO:0006508 proteolysis IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001300 Peptidase_C2_calpain_cat 64 385
No external refs found!