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  5. evm.model.tig00000903.41

evm.model.tig00000903.41


Description : (at2g32730 : 545.0) 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit; FUNCTIONS IN: enzyme regulator activity, binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cytosol, proteasome regulatory particle, base subcomplex, proteasome complex; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Proteasome/cyclosome, regulatory subunit (InterPro:IPR002015), Armadillo-type fold (InterPro:IPR016024), 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (InterPro:IPR016642); BEST Arabidopsis thaliana protein match is: 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit (TAIR:AT1G04810.1); Has 1219 Blast hits to 1116 proteins in 309 species: Archae - 13; Bacteria - 56; Metazoa - 400; Fungi - 388; Plants - 137; Viruses - 0; Other Eukaryotes - 225 (source: NCBI BLink). & (reliability: 1090.0) & (original description: no original description)


Gene families : OG_42_0002937 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002937_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00000903.41
Cluster HCCA clusters: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
167705 No alias 26S proteasome regulatory complex, non-ATPase... 0.01 Orthogroups_2024-Update
At2g32730 No alias 26S proteasome non-ATPase regulatory subunit 1 homolog A... 0.01 Orthogroups_2024-Update
Bradi5g21080 No alias 26S proteasome regulatory complex, non-ATPase... 0.01 Orthogroups_2024-Update
Brara.D01987.1 No alias regulatory component *(RPN2) of 26S proteasome 0.01 Orthogroups_2024-Update
Cre17.g727950 No alias 26S proteasome regulatory complex, non-ATPase... 0.04 Orthogroups_2024-Update
Glyma.05G241500 No alias 26S proteasome regulatory complex, non-ATPase... 0.01 Orthogroups_2024-Update
Glyma.08G048800 No alias 26S proteasome regulatory complex, non-ATPase... 0.01 Orthogroups_2024-Update
Kfl00125_0200 kfl00125_0200_v1.1 (at2g32730 : 1057.0) 26S proteasome regulatory complex,... 0.03 Orthogroups_2024-Update
MA_30487g0010 No alias (at2g32730 : 564.0) 26S proteasome regulatory complex,... 0.02 Orthogroups_2024-Update
Mp6g04700.1 No alias regulatory component RPN2 of 26S proteasome 0.02 Orthogroups_2024-Update
Pp1s114_55V6 No alias 26s proteasome regulatory subunit 0.01 Orthogroups_2024-Update
Pp1s44_155V6 No alias 26s proteasome regulatory subunit 0.02 Orthogroups_2024-Update
Seita.6G022000.1 No alias regulatory component *(RPN2) of 26S proteasome 0.02 Orthogroups_2024-Update
Seita.7G231100.1 No alias regulatory component *(RPN2) of 26S proteasome 0.02 Orthogroups_2024-Update
Sobic.006G208500.1 No alias regulatory component *(RPN2) of 26S proteasome 0.03 Orthogroups_2024-Update
Solyc05g053650 No alias 26S proteasome non-ATPase regulatory subunit 1 (AHRD... 0.01 Orthogroups_2024-Update
Solyc09g091750 No alias 26S proteasome non-ATPase regulatory subunit 1 (AHRD... 0.01 Orthogroups_2024-Update
Sopen09g034640 No alias Proteasome/cyclosome repeat 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Predicted GO
CC GO:0000502 proteasome complex IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0009894 regulation of catabolic process IEP Predicted GO
BP GO:0010498 proteasomal protein catabolic process IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0042157 lipoprotein metabolic process IEP Predicted GO
BP GO:0042176 regulation of protein catabolic process IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
CC GO:1905369 endopeptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002015 Proteasome/cyclosome_rpt 462 495
No external refs found!