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  5. Solyc05g009110

Solyc05g009110


Description : LOW QUALITY:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (AHRD V3.3 *** AT1G68390.1)


Gene families : OG_42_0000408 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000408_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g009110
Cluster HCCA clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g04220 No alias DNA binding protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.010G121800 No alias Core-2/I-branching... 0.03 Orthogroups_2024-Update
Potri.015G045400 No alias Core-2/I-branching... 0.02 Orthogroups_2024-Update
Potri.015G045500 No alias Core-2/I-branching... 0.02 Orthogroups_2024-Update
Seita.6G016700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G106100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc05g009120 No alias Core-2/I-branching... 0.05 Orthogroups_2024-Update
Sopen03g038140 No alias Core-2/I-Branching enzyme 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008375 acetylglucosaminyltransferase activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003406 Glyco_trans_14 127 342
No external refs found!