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  5. evm.model.tig00001021.3

evm.model.tig00001021.3


Description : (p04352|calm_chlre : 87.0) Calmodulin (CaM) - Chlamydomonas reinhardtii & (at2g41100 : 85.9) encodes a calmodulin-like protein, with six potential calcium binding domains. Calcium binding shown by Ca(2+)-specific shift in electrophoretic mobility. Expression induced by touch and darkness. Expression may also be developmentally controlled. Expression in growing regions of roots, vascular tissue, root/shoot junctions, trichomes, branch points of the shoot, and regions of siliques and flowers.; TOUCH 3 (TCH3); CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 5 (TAIR:AT2G27030.3). & (reliability: 171.8) & (original description: no original description)


Gene families : OG_42_0000644 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000644_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00001021.3
Cluster HCCA clusters: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
Kfl00432_0030 kfl00432_0030_v1.1 (p93171|calm_helan : 132.0) Calmodulin (CaM) -... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006302 double-strand break repair IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 26 85
IPR002048 EF_hand_dom 105 162
No external refs found!