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  5. Solyc05g009280

Solyc05g009280


Description : 3-ketoacyl-CoA synthase (AHRD V3.3 *** M1B5V3_SOLTU)


Gene families : OG_42_0000099 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g009280
Cluster HCCA clusters: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G569948 No alias 3-ketoacyl-CoA synthase 11 0.02 Orthogroups_2024-Update
Potri.015G133700 No alias 3-ketoacyl-CoA synthase 6 0.02 Orthogroups_2024-Update
Potri.018G032200 No alias 3-ketoacyl-CoA synthase 11 0.03 Orthogroups_2024-Update
Solyc12g006820 No alias 3-ketoacyl-CoA synthase (AHRD V3.3 *** M0ZKJ4_SOLTU) 0.03 Orthogroups_2024-Update
Sopen04g034040 No alias FAE1/Type III polyketide synthase-like protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013601 FAE1_typ3_polyketide_synth 77 366
IPR013747 ACP_syn_III_C 382 464
No external refs found!