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  5. Solyc05g009900

Solyc05g009900


Description : TCP transcription factor 25


Gene families : OG_42_0000203 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g009900
Cluster HCCA clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
89227 No alias TCP family transcription factor 4 0.03 Orthogroups_2024-Update
At3g02150 No alias Transcription factor TCP13... 0.03 Orthogroups_2024-Update
Glyma.17G079900 No alias TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 0.03 Orthogroups_2024-Update
Glyma.19G030900 No alias plastid transcription factor 1 0.03 Orthogroups_2024-Update
HORVU2Hr1G060120.1 No alias TCP-type transcription factor 0.04 Orthogroups_2024-Update
HORVU5Hr1G008340.6 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
MA_12784g0010 No alias (at3g02150 : 113.0) a chloroplast trans-acting factor of... 0.03 Orthogroups_2024-Update
Potri.019G091300 No alias TCP family transcription factor 4 0.03 Orthogroups_2024-Update
Sobic.008G172200.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Solyc03g119770 No alias branched1a 0.03 Orthogroups_2024-Update
Sopen02g033790 No alias TCP family transcription factor 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005333 Transcription_factor_TCP 135 253
No external refs found!