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  5. evm.model.tig00001265.7

evm.model.tig00001265.7


Description : (at3g49601 : 98.2) FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf21 (InterPro:IPR013170); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 196.4) & (original description: no original description)


Gene families : OG_42_0003192 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003192_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00001265.7
Cluster HCCA clusters: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
Bradi5g21090 No alias Function unknown 0.01 Orthogroups_2024-Update
HORVU5Hr1G115320.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Potri.006G233000 No alias Function unknown 0.02 Orthogroups_2024-Update
Seita.1G026200.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.004G102000.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003352 regulation of cilium movement IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004615 phosphomannomutase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006553 lysine metabolic process IEP Predicted GO
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009085 lysine biosynthetic process IEP Predicted GO
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predicted GO
BP GO:0009225 nucleotide-sugar metabolic process IEP Predicted GO
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Predicted GO
BP GO:0009298 GDP-mannose biosynthetic process IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0019673 GDP-mannose metabolic process IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0030030 cell projection organization IEP Predicted GO
BP GO:0030031 cell projection assembly IEP Predicted GO
BP GO:0032879 regulation of localization IEP Predicted GO
BP GO:0032886 regulation of microtubule-based process IEP Predicted GO
CC GO:0034464 BBSome IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
CC GO:0044441 ciliary part IEP Predicted GO
CC GO:0044463 cell projection part IEP Predicted GO
BP GO:0044782 cilium organization IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0046451 diaminopimelate metabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0051270 regulation of cellular component movement IEP Predicted GO
BP GO:0060271 cilium assembly IEP Predicted GO
BP GO:0060632 regulation of microtubule-based movement IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
BP GO:0120031 plasma membrane bounded cell projection assembly IEP Predicted GO
BP GO:0120036 plasma membrane bounded cell projection organization IEP Predicted GO
CC GO:0120038 plasma membrane bounded cell projection part IEP Predicted GO
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013170 mRNA_splic_Cwf21_dom 54 97
No external refs found!