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Description : (at1g19310 : 110.0) RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT2G23780.1); Has 4673 Blast hits to 4665 proteins in 300 species: Archae - 0; Bacteria - 6; Metazoa - 2731; Fungi - 589; Plants - 822; Viruses - 25; Other Eukaryotes - 500 (source: NCBI BLink). & (reliability: 220.0) & (original description: no original description)
Gene families : OG_42_0000548 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000548_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Cyanophora release: evm.model.tig00001331.4 | |
| Cluster | HCCA clusters: Cluster_182 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi1g12570 | No alias | RING/U-box superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Brara.A01799.1 | No alias | E3 ubiquitin ligase *(RMA/MUSE) | 0.01 | Orthogroups_2024-Update | |
| Brara.G03318.1 | No alias | E3 ubiquitin ligase *(RMA/MUSE) | 0.02 | Orthogroups_2024-Update | |
| Brara.H01492.1 | No alias | E3 ubiquitin ligase *(RMA/MUSE) | 0.01 | Orthogroups_2024-Update | |
| LOC_Os02g42690 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.01 | Orthogroups_2024-Update | |
| LOC_Os12g43930 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.01 | Orthogroups_2024-Update | |
| MA_133071g0010 | No alias | (at1g19310 : 110.0) RING/U-box superfamily protein;... | 0.01 | Orthogroups_2024-Update | |
| Potri.019G100800 | No alias | RING membrane-anchor 1 | 0.01 | Orthogroups_2024-Update | |
| Seita.9G305200.1 | No alias | E3 ubiquitin ligase *(RMA/MUSE) | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G228100.2 | No alias | E3 ubiquitin ligase *(RMA/MUSE) | 0.01 | Orthogroups_2024-Update | |
| Sobic.008G188700.3 | No alias | E3 ubiquitin ligase *(RMA/MUSE) | 0.02 | Orthogroups_2024-Update | |
| Solyc10g008410 | No alias | RING/U-box superfamily protein (AHRD V3.3 *-* AT1G19310.1) | 0.01 | Orthogroups_2024-Update | |
| Sopen10g004240 | No alias | Zinc finger, C3HC4 type (RING finger) | 0.03 | Orthogroups_2024-Update | |
| evm.model.contig_2280.3 | No alias | (at2g23780 : 127.0) RING/U-box superfamily protein;... | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046872 | metal ion binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000079 | regulation of cyclin-dependent protein serine/threonine kinase activity | IEP | Predicted GO |
| BP | GO:0001932 | regulation of protein phosphorylation | IEP | Predicted GO |
| MF | GO:0005506 | iron ion binding | IEP | Predicted GO |
| BP | GO:0010207 | photosystem II assembly | IEP | Predicted GO |
| CC | GO:0016020 | membrane | IEP | Predicted GO |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Predicted GO |
| BP | GO:0019220 | regulation of phosphate metabolic process | IEP | Predicted GO |
| MF | GO:0019899 | enzyme binding | IEP | Predicted GO |
| MF | GO:0019900 | kinase binding | IEP | Predicted GO |
| MF | GO:0019901 | protein kinase binding | IEP | Predicted GO |
| MF | GO:0020037 | heme binding | IEP | Predicted GO |
| BP | GO:0022607 | cellular component assembly | IEP | Predicted GO |
| BP | GO:0031399 | regulation of protein modification process | IEP | Predicted GO |
| BP | GO:0032268 | regulation of cellular protein metabolic process | IEP | Predicted GO |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Predicted GO |
| BP | GO:0042325 | regulation of phosphorylation | IEP | Predicted GO |
| BP | GO:0043549 | regulation of kinase activity | IEP | Predicted GO |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Predicted GO |
| BP | GO:0045859 | regulation of protein kinase activity | IEP | Predicted GO |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Predicted GO |
| MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
| BP | GO:0050790 | regulation of catalytic activity | IEP | Predicted GO |
| BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | Predicted GO |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | Predicted GO |
| BP | GO:0051338 | regulation of transferase activity | IEP | Predicted GO |
| BP | GO:0051726 | regulation of cell cycle | IEP | Predicted GO |
| BP | GO:0055114 | oxidation-reduction process | IEP | Predicted GO |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Predicted GO |
| BP | GO:0065009 | regulation of molecular function | IEP | Predicted GO |
| BP | GO:0071900 | regulation of protein serine/threonine kinase activity | IEP | Predicted GO |
| BP | GO:1904029 | regulation of cyclin-dependent protein kinase activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR018957 | Znf_C3HC4_RING-type | 35 | 74 |
| No external refs found! |