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  5. Solyc05g012460

Solyc05g012460


Description : Cobalamin biosynthesis CobW-like protein (AHRD V3.3 *** AT1G26520.1)


Gene families : OG_42_0001486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001486_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g012460
Cluster HCCA clusters: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
Kfl00115_0250 kfl00115_0250_v1.... (at1g80480 : 107.0) plastid transcriptionally active 17... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0007031 peroxisome organization IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
InterPro domains Description Start Stop
IPR011629 Cbl_biosynth_CobW-like_C 272 366
IPR003495 CobW/HypB/UreG_dom 34 217
No external refs found!