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  5. Solyc05g012630

Solyc05g012630


Description : Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** A0A061EBM2_THECC)


Gene families : OG_42_0011257 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0011257_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g012630
Cluster HCCA clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Potri.008G093000 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 568 613
IPR002885 Pentatricopeptide_repeat 368 411
IPR002885 Pentatricopeptide_repeat 467 513
IPR002885 Pentatricopeptide_repeat 441 466
IPR002885 Pentatricopeptide_repeat 166 196
IPR002885 Pentatricopeptide_repeat 267 295
IPR002885 Pentatricopeptide_repeat 135 163
IPR002885 Pentatricopeptide_repeat 65 91
No external refs found!