1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. evm.model.tig00020510.27

evm.model.tig00020510.27


Description : (o49230|etr1_braol : 145.0) Ethylene receptor (EC 2.7.13.3) - Brassica oleracea (Wild cabbage) & (at1g66340 : 143.0) Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1.; ETHYLENE RESPONSE 1 (ETR1); CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction histidine kinase, hybrid-type, ethylene sensor (InterPro:IPR014525), ATPase-like, ATP-binding domain (InterPro:IPR003594), CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), GAF (InterPro:IPR003018), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: ethylene response sensor 1 (TAIR:AT2G40940.1); Has 102721 Blast hits to 98263 proteins in 3046 species: Archae - 757; Bacteria - 90102; Metazoa - 18; Fungi - 1611; Plants - 2314; Viruses - 21; Other Eukaryotes - 7898 (source: NCBI BLink). & (reliability: 258.0) & (original description: no original description)


Gene families : OG_42_0000334 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000334_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00020510.27
Cluster HCCA clusters: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
230881 No alias Signal transduction histidine kinase, hybrid-type,... 0.01 Orthogroups_2024-Update
Bradi4g00200 No alias Signal transduction histidine kinase, hybrid-type,... 0.01 Orthogroups_2024-Update
evm.model.tig00000042.43 No alias (at1g27320 : 171.0) Encodes a histidine kinases, a... 0.03 Orthogroups_2024-Update
evm.model.tig00000042.59 No alias (at1g66340 : 127.0) Similar to prokaryote sensory... 0.02 Orthogroups_2024-Update
evm.model.tig00000254.26 No alias (o49230|etr1_braol : 158.0) Ethylene receptor (EC... 0.02 Orthogroups_2024-Update
evm.model.tig00000325.13 No alias (q9m7m1|etr1_prupe : 163.0) Ethylene receptor (EC... 0.03 Orthogroups_2024-Update
evm.model.tig00020554.106 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
evm.model.tig00020961.4 No alias (at1g66340 : 144.0) Similar to prokaryote sensory... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0007165 signal transduction IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
InterPro domains Description Start Stop
IPR003018 GAF 70 257
IPR003661 HisK_dim/P 293 357
IPR003594 HATPase_C 414 555
No external refs found!