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  5. evm.model.tig00020556.70

evm.model.tig00020556.70


Description : (at2g43410 : 99.0) FPA is a gene that regulates flowering time in Arabidopsis via a pathway that is independent of daylength (the autonomous pathway). Mutations in FPA result in extremely delayed flowering. Double mutants with FCA have reduced fertility and single/double mutants have defects in siRNA mediated chromatin silencing.; FPA; CONTAINS InterPro DOMAIN/s: Spen paralogue and orthologue SPOC, C-terminal (InterPro:IPR012921), RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA recognition motif (RRM)-containing protein (TAIR:AT4G12640.1); Has 504799 Blast hits to 501692 proteins in 22138 species: Archae - 10949; Bacteria - 306025; Metazoa - 96089; Fungi - 13914; Plants - 29775; Viruses - 36050; Other Eukaryotes - 11997 (source: NCBI BLink). & (reliability: 198.0) & (original description: no original description)


Gene families : OG_42_0005823 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005823_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00020556.70
Cluster HCCA clusters: Cluster_6


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 287 350
IPR000504 RRM_dom 363 425
No external refs found!