Solyc05g014390


Description : ABC subfamily C transporter (AHRD V3.3 *** A0A077RXF4_WHEAT)


Gene families : OG_42_0000076 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g014390
Cluster HCCA clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Bradi1g37826 No alias multidrug resistance-associated protein 6 0.02 Orthogroups_2024-Update
Glyma.16G172400 No alias multidrug resistance-associated protein 14 0.03 Orthogroups_2024-Update
Kfl00337_0010 kfl00337_0010_v1.1 (at1g30420 : 370.0) member of MRP subfamily; multidrug... 0.02 Orthogroups_2024-Update
evm.model.tig00000158.83 No alias (at1g30400 : 269.0) glutathione S-conjugate transporting... 0.01 Orthogroups_2024-Update
evm.model.tig00000158.84 No alias (at2g34660 : 395.0) encodes a multidrug... 0.01 Orthogroups_2024-Update
evm.model.tig00020684.9 No alias (at1g30400 : 699.0) glutathione S-conjugate transporting... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006810 transport IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
Type GO Term Name Evidence Source
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 639 862
IPR011527 ABC1_TM_dom 9 274
IPR003439 ABC_transporter-like 953 1101
IPR003439 ABC_transporter-like 346 475
No external refs found!