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  5. evm.model.tig00020616.33

evm.model.tig00020616.33


Description : (at1g55860 : 142.0) encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis.; ubiquitin-protein ligase 1 (UPL1); CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal (InterPro:IPR000449), Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), E3 ubiquitin ligase, domain of unknown function DUF913 (InterPro:IPR010314), Ubiquitin interacting motif (InterPro:IPR003903), E3 ubiquitin ligase, domain of unknown function DUF908 (InterPro:IPR010309), HECT (InterPro:IPR000569), Armadillo-type fold (InterPro:IPR016024), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 2 (TAIR:AT1G70320.1). & (reliability: 284.0) & (original description: no original description)


Gene families : OG_42_0009968 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009968_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00020616.33
Cluster HCCA clusters: Cluster_50


Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004363 glutathione synthase activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006749 glutathione metabolic process IEP Predicted GO
BP GO:0006750 glutathione biosynthetic process IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 22 72
IPR000408 Reg_chr_condens 75 131
IPR000569 HECT_dom 875 917
IPR000569 HECT_dom 658 845
No external refs found!