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  5. Solyc01g060020

Solyc01g060020


Description : beta-1,3-glucanase TOMB13GLUB


Gene families : OG_42_0000200 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g060020
Cluster HCCA clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
233178 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
A4A49_01055 No alias glucan endo-1,3-beta-glucosidase, acidic isoform gi9 0.05 Orthogroups_2024-Update
A4A49_28305 No alias glucan endo-1,3-beta-glucosidase, basic vacuolar isoform ggib50 0.06 Orthogroups_2024-Update
Bradi2g43056 No alias beta-1,3-glucanase 1 0.04 Orthogroups_2024-Update
Bradi2g60441 No alias beta-1,3-glucanase 2 0.03 Orthogroups_2024-Update
Bradi2g60490 No alias Glycosyl hydrolase superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G125032 No alias Glycosyl hydrolase superfamily protein 0.02 Orthogroups_2024-Update
Glyma.19G134700 No alias beta-1,3-glucanase 1 0.03 Orthogroups_2024-Update
HORVU3Hr1G105400.3 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
HORVU3Hr1G105420.2 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
HORVU3Hr1G105630.7 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
HORVU7Hr1G051310.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
LOC_Os01g71340 No alias glycosyl hydrolases family 17, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os01g71820 No alias glycosyl hydrolases family 17, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g71930 No alias glycosyl hydrolases family 17 protein, expressed 0.02 Orthogroups_2024-Update
MA_10266495g0010 No alias (p07979|gub_nicpl : 308.0) Lichenase precursor (EC... 0.04 Orthogroups_2024-Update
MA_10337257g0010 No alias (p49237|e13b_maize : 232.0) Glucan... 0.03 Orthogroups_2024-Update
MA_10432716g0010 No alias (p49237|e13b_maize : 235.0) Glucan... 0.02 Orthogroups_2024-Update
MA_10432716g0030 No alias (p49237|e13b_maize : 223.0) Glucan... 0.03 Orthogroups_2024-Update
MA_475809g0010 No alias (at4g16260 : 249.0) Glycosyl hydrolase superfamily... 0.03 Orthogroups_2024-Update
MA_934111g0010 No alias (p49237|e13b_maize : 195.0) Glucan... 0.03 Orthogroups_2024-Update
Mp2g12240.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 Orthogroups_2024-Update
Mp2g14720.1 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.05 Orthogroups_2024-Update
PSME_00010153-RA No alias (p15797|e13b_tobac : 286.0) Glucan... 0.03 Orthogroups_2024-Update
PSME_00017374-RA No alias (p49237|e13b_maize : 292.0) Glucan... 0.04 Orthogroups_2024-Update
PSME_00019982-RA No alias (p07979|gub_nicpl : 308.0) Lichenase precursor (EC... 0.03 Orthogroups_2024-Update
PSME_00023819-RA No alias (p52408|e13b_prupe : 305.0) Glucan... 0.03 Orthogroups_2024-Update
PSME_00025205-RA No alias (p49237|e13b_maize : 286.0) Glucan... 0.03 Orthogroups_2024-Update
PSME_00037375-RA No alias (p49237|e13b_maize : 314.0) Glucan... 0.03 Orthogroups_2024-Update
Potri.006G048100 No alias beta-1,3-glucanase 1 0.03 Orthogroups_2024-Update
Potri.016G057600 No alias beta-1,3-glucanase 1 0.03 Orthogroups_2024-Update
Seita.5G448500.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Sobic.003G421700.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Sobic.003G422000.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sobic.009G183400.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Solyc03g025650 No alias Beta-1,3-glucanase (AHRD V3.3 *** Q8S2G6_ORYSJ) 0.02 Orthogroups_2024-Update
Solyc10g079860 No alias LEQB L.esculentum TomQ'b beta(1,3)glucanase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 1 306
IPR000490 Glyco_hydro_17 329 371
No external refs found!