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  5. Solyc05g015730

Solyc05g015730


No description available


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g015730
Cluster HCCA clusters: Cluster_291

Target Alias Description ECC score Gene Family Method Actions
A4A49_23145 No alias mads-box protein soc1 0.03 Orthogroups_2024-Update
A4A49_23146 No alias mads-box transcription factor 6 0.06 Orthogroups_2024-Update
A4A49_26362 No alias floral homeotic protein globosa 0.03 Orthogroups_2024-Update
Bradi3g41260 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Brara.B03768.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Brara.C01460.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
Brara.D02757.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G097059 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
GRMZM2G129034 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
GRMZM2G148693 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
GRMZM2G171365 No alias AGAMOUS-like 20 0.02 Orthogroups_2024-Update
GRMZM2G334225 No alias AGAMOUS-like 66 0.05 Orthogroups_2024-Update
Glyma.05G163200 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.05G227300 No alias AGAMOUS-like 62 0.02 Orthogroups_2024-Update
Glyma.08G282500 No alias AGAMOUS-like 29 0.03 Orthogroups_2024-Update
Glyma.10G084800 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
Glyma.10G085900 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
Glyma.17G080900 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.17G132700 No alias AGAMOUS-like 19 0.03 Orthogroups_2024-Update
LOC_Os02g45770 No alias OsMADS6 - MADS-box family gene with MIKCc type-box, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g49150 No alias OsMADS17 - MADS-box family gene with MIKCc type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g11970 No alias OsMADS63 - MADS-box family gene with MIKC* type-box, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g23950 No alias OsMADS59 - MADS-box family gene with MIKCc type-box 0.03 Orthogroups_2024-Update
Potri.001G284301 No alias AGAMOUS-like 21 0.03 Orthogroups_2024-Update
Potri.004G010200 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
Potri.004G064300 No alias K-box region and MADS-box transcription factor family protein 0.04 Orthogroups_2024-Update
Potri.004G115500 No alias K-box region and MADS-box transcription factor family protein 0.03 Orthogroups_2024-Update
Sobic.001G314400.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G221500.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Sopen03g033910 No alias K-box region 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!