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  5. evm.model.tig00020684.6

evm.model.tig00020684.6


Description : no hits & (original description: no original description)


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00020684.6
Cluster HCCA clusters: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
A4A49_18116 No alias ring-h2 finger protein atl78 0.02 Orthogroups_2024-Update
A4A49_29196 No alias ring-h2 finger protein atl72 0.02 Orthogroups_2024-Update
A4A49_30512 No alias ring-h2 finger protein atl54 0.02 Orthogroups_2024-Update
A4A49_40065 No alias ring-h2 finger protein atl70 0.01 Orthogroups_2024-Update
Bradi4g32634 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Brara.C01887.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.G00123.1 No alias regulatory E3 ubiquitin ligase targeted to IRT1 *(IDF1) 0.01 Orthogroups_2024-Update
Glyma.06G310600 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
HORVU2Hr1G079170.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Kfl00066_0030 kfl00066_0030_v1.1 (at1g23980 : 83.2) RING/U-box superfamily protein;... 0.01 Orthogroups_2024-Update
LOC_Os02g46600 No alias RING-H2 finger protein ATL5G, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os02g52210 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.01 Orthogroups_2024-Update
LOC_Os04g50100 No alias RING-H2 finger protein ATL5G, putative, expressed 0.01 Orthogroups_2024-Update
MA_129306g0010 No alias (at5g42200 : 80.1) RING/U-box superfamily protein;... 0.01 Orthogroups_2024-Update
Potri.002G101800 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Potri.010G206200 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Potri.014G076800 No alias RING/U-box superfamily protein 0.01 Orthogroups_2024-Update
Pp1s257_3V6 No alias ac009177_16 ring-h2 zinc finger protein atl6 0.01 Orthogroups_2024-Update
Pp1s73_131V6 No alias ring-h2 finger protein atl2c 0.01 Orthogroups_2024-Update
Seita.1G306500.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.002G038733.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.01 Orthogroups_2024-Update
Solyc01g081040 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc11g073170 No alias LOW QUALITY:RING/U-box superfamily protein, putative... 0.01 Orthogroups_2024-Update
Sopen03g005910 No alias Ring finger domain 0.01 Orthogroups_2024-Update
Sopen03g031440 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen09g005360 No alias Ring finger domain 0.01 Orthogroups_2024-Update
Sopen12g029870 No alias Ring finger domain 0.02 Orthogroups_2024-Update
evm.model.contig_2102.17 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0007155 cell adhesion IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0017013 protein flavinylation IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0018298 protein-chromophore linkage IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0022610 biological adhesion IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 627 668
IPR000008 C2_dom 958 1070
No external refs found!