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  5. Solyc05g016230

Solyc05g016230


Description : Protein BREAST CANCER SUSCEPTIBILITY 1-like protein (AHRD V3.3 *** W9QZP3_9ROSA)


Gene families : OG_42_0000927 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000927_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g016230
Cluster HCCA clusters: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
Brara.I05514.1 No alias component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.03 Orthogroups_2024-Update
HORVU2Hr1G088840.1 No alias component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003995 acyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0003997 acyl-CoA oxidase activity IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP Predicted GO
MF GO:0004827 proline-tRNA ligase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006333 chromatin assembly or disassembly IEP Predicted GO
BP GO:0006433 prolyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006635 fatty acid beta-oxidation IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009062 fatty acid catabolic process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016987 sigma factor activity IEP Predicted GO
BP GO:0019395 fatty acid oxidation IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0034440 lipid oxidation IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0042274 ribosomal small subunit biogenesis IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0044242 cellular lipid catabolic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
BP GO:0072329 monocarboxylic acid catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001357 BRCT_dom 236 302
IPR001357 BRCT_dom 338 447
No external refs found!