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  5. evm.model.tig00020801.83

evm.model.tig00020801.83


Description : (at3g49660 : 138.0) Transducin/WD40 repeat-like superfamily protein; FUNCTIONS IN: nucleotide binding; INVOLVED IN: G-protein coupled receptor protein signaling pathway; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1); Has 118516 Blast hits to 43755 proteins in 1024 species: Archae - 92; Bacteria - 12360; Metazoa - 47439; Fungi - 25856; Plants - 15887; Viruses - 9; Other Eukaryotes - 16873 (source: NCBI BLink). & (p49027|gblp_orysa : 132.0) Guanine nucleotide-binding protein subunit beta-like protein (GPB-LR) (RWD) - Oryza sativa (Rice) & (reliability: 258.0) & (original description: no original description)


Gene families : OG_42_0001711 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001711_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00020801.83
Cluster HCCA clusters: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
Cre12.g552900 No alias Transducin/WD40 repeat-like superfamily protein 0.01 Orthogroups_2024-Update
Glyma.10G027100 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
evm.model.contig_4450.3 No alias (at5g52820 : 163.0) WD-40 repeat family protein /... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 132 168
IPR001680 WD40_repeat 26 60
IPR001680 WD40_repeat 91 127
IPR001680 WD40_repeat 2 21
IPR001680 WD40_repeat 183 210
No external refs found!