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Description : GSVIVT00005628001, HT7 (AHRD V3.3 *** A0A0A9GN13_ARUDO)
Gene families : OG_42_0001286 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001286_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc05g018240 | |
| Cluster | HCCA clusters: Cluster_152 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_40796 | No alias | crs2-associated factor 1, chloroplastic | 0.03 | Orthogroups_2024-Update | |
| At1g23400 | No alias | CAF2 [Source:UniProtKB/TrEMBL;Acc:A0A178WC04] | 0.03 | Orthogroups_2024-Update | |
| Bradi3g15650 | No alias | RNA-binding CRS1 / YhbY (CRM) domain-containing protein | 0.02 | Orthogroups_2024-Update | |
| HORVU0Hr1G006680.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| LOC_Os01g21990 | No alias | CRS2-associated factor 2, chloroplast precursor,... | 0.02 | Orthogroups_2024-Update | |
| LOC_Os08g07790 | No alias | CRS2-associated factor 2, mitochondrial precursor,... | 0.02 | Orthogroups_2024-Update | |
| MA_206934g0010 | No alias | (at1g23400 : 115.0) Promotes the splicing of chloroplast... | 0.03 | Orthogroups_2024-Update | |
| Potri.006G156200 | No alias | RNA-binding CRS1 / YhbY (CRM) domain-containing protein | 0.03 | Orthogroups_2024-Update | |
| Potri.010G042500 | No alias | RNA-binding CRS1 / YhbY (CRM) domain-containing protein | 0.03 | Orthogroups_2024-Update | |
| Seita.5G154500.1 | No alias | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.04 | Orthogroups_2024-Update | |
| Sobic.003G151500.1 | No alias | component *(CAF) of CRS2-CAF plastidial RNA splicing... | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | IEP | Predicted GO |
| CC | GO:0005777 | peroxisome | IEP | Predicted GO |
| BP | GO:0006405 | RNA export from nucleus | IEP | Predicted GO |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Predicted GO |
| BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | Predicted GO |
| BP | GO:0006760 | folic acid-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006811 | ion transport | IEP | Predicted GO |
| BP | GO:0006813 | potassium ion transport | IEP | Predicted GO |
| BP | GO:0006835 | dicarboxylic acid transport | IEP | Predicted GO |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Predicted GO |
| BP | GO:0007031 | peroxisome organization | IEP | Predicted GO |
| MF | GO:0008483 | transaminase activity | IEP | Predicted GO |
| CC | GO:0008541 | proteasome regulatory particle, lid subcomplex | IEP | Predicted GO |
| BP | GO:0009396 | folic acid-containing compound biosynthetic process | IEP | Predicted GO |
| MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0015740 | C4-dicarboxylate transport | IEP | Predicted GO |
| BP | GO:0015743 | malate transport | IEP | Predicted GO |
| BP | GO:0015931 | nucleobase-containing compound transport | IEP | Predicted GO |
| MF | GO:0016645 | oxidoreductase activity, acting on the CH-NH group of donors | IEP | Predicted GO |
| MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Predicted GO |
| MF | GO:0031072 | heat shock protein binding | IEP | Predicted GO |
| BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Predicted GO |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | Predicted GO |
| CC | GO:0042579 | microbody | IEP | Predicted GO |
| BP | GO:0043248 | proteasome assembly | IEP | Predicted GO |
| BP | GO:0050657 | nucleic acid transport | IEP | Predicted GO |
| BP | GO:0050658 | RNA transport | IEP | Predicted GO |
| BP | GO:0051028 | mRNA transport | IEP | Predicted GO |
| MF | GO:0051082 | unfolded protein binding | IEP | Predicted GO |
| BP | GO:0051168 | nuclear export | IEP | Predicted GO |
| BP | GO:0051169 | nuclear transport | IEP | Predicted GO |
| BP | GO:0051205 | protein insertion into membrane | IEP | Predicted GO |
| BP | GO:0051236 | establishment of RNA localization | IEP | Predicted GO |
| BP | GO:0051641 | cellular localization | IEP | Predicted GO |
| BP | GO:0071805 | potassium ion transmembrane transport | IEP | Predicted GO |
| BP | GO:0072657 | protein localization to membrane | IEP | Predicted GO |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |