evm.model.tig00020902.3

Description : (at3g55110 : 182.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: white-brown complex homolog 19 (TAIR:AT3G55130.1); Has 385599 Blast hits to 351876 proteins in 4105 species: Archae - 7169; Bacteria - 305821; Metazoa - 8275; Fungi - 6295; Plants - 5429; Viruses - 12; Other Eukaryotes - 52598 (source: NCBI BLink). & (q7fmw4|pdr15_orysa : 179.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 364.0) & (original description: no original description)

Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Cyanophora release: evm.model.tig00020902.3
Cluster	HCCA clusters: Cluster_179

Target	Alias	Description	ECC score	Gene Family Method
101338	No alias	pleiotropic drug resistance 11	0.01	Orthogroups_2024-Update
At2g26910	No alias	PEC1 [Source:UniProtKB/TrEMBL;Acc:A0A178VNA5]	0.02	Orthogroups_2024-Update
Bradi1g26040	No alias	pleiotropic drug resistance 6	0.02	Orthogroups_2024-Update
Bradi2g10110	No alias	pleiotropic drug resistance 12	0.02	Orthogroups_2024-Update
Bradi2g43120	No alias	pleiotropic drug resistance 12	0.01	Orthogroups_2024-Update
Bradi2g43150	No alias	pleiotropic drug resistance 12	0.02	Orthogroups_2024-Update
Bradi2g48620	No alias	pleiotropic drug resistance 1	0.02	Orthogroups_2024-Update
Bradi4g28270	No alias	pleiotropic drug resistance 12	0.01	Orthogroups_2024-Update
Cre12.g540650	No alias	pleiotropic drug resistance 3	0.02	Orthogroups_2024-Update
Glyma.05G011900	No alias	pleiotropic drug resistance 4	0.02	Orthogroups_2024-Update
Glyma.07G233900	No alias	pleiotropic drug resistance 9	0.02	Orthogroups_2024-Update
HORVU5Hr1G106850.1	No alias	subfamily ABCG transporter	0.01	Orthogroups_2024-Update
Kfl00175_0190	kfl00175_0190_v1.1	(at2g29940 : 809.0) pleiotropic drug resistance 3...	0.03	Orthogroups_2024-Update
Kfl00361_0030	kfl00361_0030_v1.1	(q5z9s8\|pdr12_orysa : 1282.0) Pleiotropic drug...	0.02	Orthogroups_2024-Update
Kfl00616_0050	kfl00616_0050_v1.1	(at1g59870 : 1348.0) ATP binding cassette transporter....	0.01	Orthogroups_2024-Update
LOC_Os01g42410	No alias	pleiotropic drug resistance protein, putative, expressed	0.01	Orthogroups_2024-Update
MA_10430834g0020	No alias	(q7fmw4\|pdr15_orysa : 384.0) Pleiotropic drug resistance...	0.01	Orthogroups_2024-Update
MA_105476g0010	No alias	(q2pcf1\|pdr2_nicpl : 1910.0) Pleiotropic drug resistance...	0.02	Orthogroups_2024-Update
Mp1g25350.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Pp1s170_10V6	No alias	atp-binding cassette	0.02	Orthogroups_2024-Update
Seita.2G179600.1	No alias	subfamily ABCG transporter	0.01	Orthogroups_2024-Update
Seita.4G181500.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Seita.9G304200.1	No alias	subfamily ABCG transporter	0.02	Orthogroups_2024-Update
Sobic.001G190900.1	No alias	subfamily ABCG transporter	0.01	Orthogroups_2024-Update
Solyc09g091660	No alias	Pleiotropic drug resistance ABC transporter (AHRD V3.3...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Predicted GO
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Predicted GO
MF	GO:0005215	transporter activity	IEP	Predicted GO
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Predicted GO
BP	GO:0006810	transport	IEP	Predicted GO
BP	GO:0006812	cation transport	IEP	Predicted GO
BP	GO:0007165	signal transduction	IEP	Predicted GO
MF	GO:0008324	cation transmembrane transporter activity	IEP	Predicted GO
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Predicted GO
BP	GO:0009187	cyclic nucleotide metabolic process	IEP	Predicted GO
BP	GO:0009190	cyclic nucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0009889	regulation of biosynthetic process	IEP	Predicted GO
BP	GO:0010468	regulation of gene expression	IEP	Predicted GO
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Predicted GO
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015696	ammonium transport	IEP	Predicted GO
MF	GO:0016849	phosphorus-oxygen lyase activity	IEP	Predicted GO
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Predicted GO
BP	GO:0019222	regulation of metabolic process	IEP	Predicted GO
MF	GO:0022804	active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
MF	GO:0030151	molybdenum ion binding	IEP	Predicted GO
BP	GO:0031323	regulation of cellular metabolic process	IEP	Predicted GO
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Predicted GO
BP	GO:0035556	intracellular signal transduction	IEP	Predicted GO
MF	GO:0042623	ATPase activity, coupled	IEP	Predicted GO
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEP	Predicted GO
MF	GO:0043492	ATPase activity, coupled to movement of substances	IEP	Predicted GO
MF	GO:0043565	sequence-specific DNA binding	IEP	Predicted GO
BP	GO:0048583	regulation of response to stimulus	IEP	Predicted GO
BP	GO:0050789	regulation of biological process	IEP	Predicted GO
BP	GO:0050794	regulation of cellular process	IEP	Predicted GO
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0051179	localization	IEP	Predicted GO
BP	GO:0051234	establishment of localization	IEP	Predicted GO
BP	GO:0051252	regulation of RNA metabolic process	IEP	Predicted GO
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Predicted GO
BP	GO:0065007	biological regulation	IEP	Predicted GO
MF	GO:0070001	aspartic-type peptidase activity	IEP	Predicted GO
BP	GO:0071705	nitrogen compound transport	IEP	Predicted GO
BP	GO:0080090	regulation of primary metabolic process	IEP	Predicted GO
BP	GO:0080134	regulation of response to stress	IEP	Predicted GO
BP	GO:1901031	regulation of response to reactive oxygen species	IEP	Predicted GO
BP	GO:1902882	regulation of response to oxidative stress	IEP	Predicted GO
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Predicted GO
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	171	325
IPR013525	ABC_2_trans	474	686

External Links

No external refs found!

evm.model.tig00020902.3

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation