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Description : Cell wall protein AWA1 isoform 1 (AHRD V3.3 *** A0A061DLI6_THECC)
Gene families : OG_42_0003436 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003436_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc05g018750 | |
| Cluster | HCCA clusters: Cluster_22 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 438753 | No alias | Kinase-related protein of unknown function (DUF1296) | 0.03 | Orthogroups_2024-Update | |
| Pp1s199_24V6 | No alias | MLP3.11; expressed protein [Arabidopsis thaliana] | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000175 | 3'-5'-exoribonuclease activity | IEP | Predicted GO |
| BP | GO:0000226 | microtubule cytoskeleton organization | IEP | Predicted GO |
| BP | GO:0000289 | nuclear-transcribed mRNA poly(A) tail shortening | IEP | Predicted GO |
| CC | GO:0000922 | spindle pole | IEP | Predicted GO |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Predicted GO |
| MF | GO:0004518 | nuclease activity | IEP | Predicted GO |
| MF | GO:0004532 | exoribonuclease activity | IEP | Predicted GO |
| MF | GO:0004535 | poly(A)-specific ribonuclease activity | IEP | Predicted GO |
| MF | GO:0004576 | oligosaccharyl transferase activity | IEP | Predicted GO |
| MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | Predicted GO |
| CC | GO:0005634 | nucleus | IEP | Predicted GO |
| CC | GO:0005783 | endoplasmic reticulum | IEP | Predicted GO |
| CC | GO:0005815 | microtubule organizing center | IEP | Predicted GO |
| BP | GO:0006099 | tricarboxylic acid cycle | IEP | Predicted GO |
| BP | GO:0006101 | citrate metabolic process | IEP | Predicted GO |
| BP | GO:0006259 | DNA metabolic process | IEP | Predicted GO |
| BP | GO:0006401 | RNA catabolic process | IEP | Predicted GO |
| BP | GO:0006402 | mRNA catabolic process | IEP | Predicted GO |
| BP | GO:0007010 | cytoskeleton organization | IEP | Predicted GO |
| BP | GO:0007020 | microtubule nucleation | IEP | Predicted GO |
| MF | GO:0008964 | phosphoenolpyruvate carboxylase activity | IEP | Predicted GO |
| BP | GO:0015977 | carbon fixation | IEP | Predicted GO |
| BP | GO:0016071 | mRNA metabolic process | IEP | Predicted GO |
| MF | GO:0016796 | exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predicted GO |
| MF | GO:0016896 | exoribonuclease activity, producing 5'-phosphomonoesters | IEP | Predicted GO |
| BP | GO:0016999 | antibiotic metabolic process | IEP | Predicted GO |
| MF | GO:0043015 | gamma-tubulin binding | IEP | Predicted GO |
| CC | GO:0043226 | organelle | IEP | Predicted GO |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0043229 | intracellular organelle | IEP | Predicted GO |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Predicted GO |
| CC | GO:0044424 | intracellular part | IEP | Predicted GO |
| CC | GO:0044464 | cell part | IEP | Predicted GO |
| MF | GO:0047429 | nucleoside-triphosphate diphosphatase activity | IEP | Predicted GO |
| MF | GO:0051082 | unfolded protein binding | IEP | Predicted GO |
| BP | GO:0072350 | tricarboxylic acid metabolic process | IEP | Predicted GO |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR009719 | GIP1 | 17 | 76 |
| No external refs found! |