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  5. Solyc05g018760

Solyc05g018760


Description : RING/U-box superfamily protein, putative (AHRD V3.3 *** A0A061DMB3_THECC)


Gene families : OG_42_0000206 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000206_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Solyc05g018760
Cluster HCCA clusters: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
A4A49_12023 No alias putative e3 ubiquitin-protein ligase xerico 0.03 Orthogroups_2024-Update
Bradi5g19180 No alias brassinosteroid-responsive RING-H2 0.03 Orthogroups_2024-Update
LOC_Os04g49000 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g06090 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_15246g0010 No alias (at2g04240 : 83.2) Encodes a small protein with an... 0.03 Orthogroups_2024-Update
MA_447489g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_754688g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_9409078g0010 No alias (at3g43430 : 99.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
Seita.1G273100.1 No alias E3 ubiquitin ligase *(BRH) 0.02 Orthogroups_2024-Update
Seita.7G209400.1 No alias E3 ubiquitin ligase *(BRH) 0.05 Orthogroups_2024-Update
Sobic.003G123300.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G189700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.007G046400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.010G006400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen12g002180 No alias Ring finger domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 92 136
No external refs found!