Solyc05g021190

Description : LOW QUALITY:Photosystem II D2 protein (AHRD V3.3 *-* PSBD_PLETE)

Gene families : OG_42_0003102 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003102_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc05g021190
Cluster	HCCA clusters: Cluster_198

Target	Alias	Description	ECC score	Gene Family Method
137879	No alias	photosystem II reaction center protein D	0.03	Orthogroups_2024-Update
Bradi1g78076	No alias	photosystem II reaction center protein D	0.03	Orthogroups_2024-Update
LOC_Os04g16872	No alias	photosystem II D2 protein, putative, expressed	0.03	Orthogroups_2024-Update
Potri.001G331000	No alias	photosystem II reaction center protein D	0.04	Orthogroups_2024-Update
Solyc09g031730	No alias	LOW QUALITY:Photosystem II D2 protein (AHRD V3.3 - PSBD_PHAVU)	0.03	Orthogroups_2024-Update
Solyc09g055950	No alias	Photosystem II D2 protein (AHRD V3.3 - PSBD_MANES)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0009055	electron transfer activity	None	Extended
BP	GO:0009767	photosynthetic electron transport chain	None	Extended
BP	GO:0009772	photosynthetic electron transport in photosystem II	IEA	InterProScan predictions
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
BP	GO:0019684	photosynthesis, light reaction	IEA	InterProScan predictions
BP	GO:0022900	electron transport chain	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	IEA	InterProScan predictions
BP	GO:0055114	oxidation-reduction process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005337	nucleoside transmembrane transporter activity	IEP	Predicted GO
BP	GO:0008037	cell recognition	IEP	Predicted GO
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Predicted GO
BP	GO:0022414	reproductive process	IEP	Predicted GO
BP	GO:0048544	recognition of pollen	IEP	Predicted GO
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000484	Photo_RC_L/M	19	82

External Links

No external refs found!