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  5. Solyc05g024370

Solyc05g024370


Description : disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *-* AT5G17680.2)


Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g024370
Cluster HCCA clusters: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
Glyma.06G265000 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Orthogroups_2024-Update
Glyma.16G085200 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.04 Orthogroups_2024-Update
LOC_Os08g32890 No alias disease resistance protein RPM1, putative, expressed 0.02 Orthogroups_2024-Update
Sopen02g026700 No alias NB-ARC domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
InterPro domains Description Start Stop
IPR002182 NB-ARC 3 214
No external refs found!