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  5. evm.model.tig00020999.4

evm.model.tig00020999.4


Description : (at5g52820 : 84.7) WD-40 repeat family protein / notchless protein, putative; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), NLE (InterPro:IPR012972), WD40 repeat (InterPro:IPR001680), G-protein, beta subunit (InterPro:IPR001632), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 169.4) & (original description: no original description)


Gene families : OG_42_0061827 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00020999.4
Cluster HCCA clusters: Cluster_95


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006753 nucleoside phosphate metabolic process IEP Predicted GO
BP GO:0009117 nucleotide metabolic process IEP Predicted GO
BP GO:0009165 nucleotide biosynthetic process IEP Predicted GO
BP GO:0009187 cyclic nucleotide metabolic process IEP Predicted GO
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Predicted GO
BP GO:0016032 viral process IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016849 phosphorus-oxygen lyase activity IEP Predicted GO
CC GO:0019031 viral envelope IEP Predicted GO
BP GO:0019058 viral life cycle IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
CC GO:0036338 viral membrane IEP Predicted GO
BP GO:0044403 symbiont process IEP Predicted GO
BP GO:0044419 interspecies interaction between organisms IEP Predicted GO
CC GO:0044423 virion part IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 610 640
IPR001680 WD40_repeat 1057 1083
IPR001680 WD40_repeat 759 796
IPR001680 WD40_repeat 943 974
IPR001680 WD40_repeat 855 881
IPR001680 WD40_repeat 1088 1125
No external refs found!