1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc05g026360

Solyc05g026360


Description : Pollen-specific SF21-like protein (AHRD V3.3 *** G7LJK8_MEDTR)


Gene families : OG_42_0001111 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001111_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g026360
Cluster HCCA clusters: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
At5g56750 No alias Protein NDL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJT7] 0.02 Orthogroups_2024-Update
Brara.J01101.1 No alias regulatory protein *(NDL) of G-protein signalling 0.05 Orthogroups_2024-Update
GRMZM2G413857 No alias N-MYC downregulated-like 1 0.03 Orthogroups_2024-Update
Sobic.003G034000.1 No alias regulatory protein *(NDL) of G-protein signalling 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004142 NDRG 39 323
No external refs found!