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  5. evm.model.tig00021352.60

evm.model.tig00021352.60


Description : (q03033|ef1a_wheat : 155.0) Elongation factor 1-alpha (EF-1-alpha) - Triticum aestivum (Wheat) & (at5g60390 : 152.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: calmodulin binding, translation elongation factor activity; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion, nucleus, cytoplasm; EXPRESSED IN: cotyledon, male gametophyte, guard cell, pollen tube, seed; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000), Translation elongation factor EF1A, eukaryotic/archaeal (InterPro:IPR004539); BEST Arabidopsis thaliana protein match is: GTP binding Elongation factor Tu family protein (TAIR:AT1G07940.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 304.0) & (original description: no original description)


Gene families : OG_42_0000485 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000485_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00021352.60
Cluster HCCA clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
HORVU6Hr1G085320.3 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.02 Orthogroups_2024-Update
HORVU6Hr1G085370.2 No alias aminoacyl-tRNA binding factor *(eEF1A)) 0.02 Orthogroups_2024-Update
Pp1s263_8V6 No alias elongation factor 1- 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000795 TF_GTP-bd_dom 5 83
No external refs found!