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  5. evm.model.tig00021435.44

evm.model.tig00021435.44


Description : (at3g43810 : 228.0) EF hand domain protein encodes a calmodulin. Can functionally complement a yeast CaM mutant.; calmodulin 7 (CAM7); FUNCTIONS IN: calcium ion binding; INVOLVED IN: detection of calcium ion, calcium-mediated signaling, regulation of photomorphogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand-like domain (InterPro:IPR011992), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 5 (TAIR:AT2G27030.3); Has 33955 Blast hits to 23167 proteins in 1763 species: Archae - 4; Bacteria - 223; Metazoa - 14467; Fungi - 7347; Plants - 6966; Viruses - 0; Other Eukaryotes - 4948 (source: NCBI BLink). & (p17928|calm_medsa : 227.0) Calmodulin (CaM) - Medicago sativa (Alfalfa) & (reliability: 456.0) & (original description: no original description)


Gene families : OG_42_0000315 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00021435.44
Cluster HCCA clusters: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
181303 No alias calmodulin 5 0.01 Orthogroups_2024-Update
A4A49_63715 No alias calmodulin-7 0.03 Orthogroups_2024-Update
Bradi1g17237 No alias calmodulin 5 0.02 Orthogroups_2024-Update
Brara.D01606.1 No alias calcium sensor *(CML) & calcium sensor *(CaM) 0.01 Orthogroups_2024-Update
Brara.G02648.1 No alias calcium sensor *(CML) & calcium sensor *(CaM) 0.01 Orthogroups_2024-Update
Brara.J01511.1 No alias calcium sensor *(CML) & calcium sensor *(CaM) 0.01 Orthogroups_2024-Update
Cre03.g178350 No alias calmodulin 4 0.02 Orthogroups_2024-Update
Glyma.03G004100 No alias calmodulin 5 0.01 Orthogroups_2024-Update
Glyma.14G040600 No alias calmodulin 5 0.03 Orthogroups_2024-Update
Glyma.19G068300 No alias calmodulin 5 0.01 Orthogroups_2024-Update
Glyma.20G211700 No alias calmodulin-like 11 0.02 Orthogroups_2024-Update
HORVU2Hr1G016740.1 No alias calcium sensor *(CML) 0.02 Orthogroups_2024-Update
HORVU3Hr1G038010.1 No alias calcium sensor *(CML) & calcium sensor *(CaM) 0.02 Orthogroups_2024-Update
Kfl00734_0010 kfl00734_0010_v1.1 (at3g43810 : 285.0) EF hand domain protein encodes a... 0.05 Orthogroups_2024-Update
MA_52889g0010 No alias (at5g37780 : 246.0) encodes a calmodulin that is... 0.01 Orthogroups_2024-Update
PSME_00047911-RA No alias (p13868|calm1_soltu : 243.0) Calmodulin-1 (CaM-1) -... 0.02 Orthogroups_2024-Update
Pp1s18_255V6 No alias calmodulin 0.02 Orthogroups_2024-Update
Seita.3G380800.1 No alias calcium sensor *(CML) 0.01 Orthogroups_2024-Update
Seita.5G048500.1 No alias calcium sensor *(CML) & calcium sensor *(CaM) 0.02 Orthogroups_2024-Update
Sobic.003G125650.1 No alias calcium sensor *(CML) & calcium sensor *(CaM) 0.02 Orthogroups_2024-Update
Sobic.009G180000.1 No alias calcium sensor *(CML) & calcium sensor *(CaM) 0.01 Orthogroups_2024-Update
Solyc03g098050 No alias Calmodulin 6 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003714 transcription corepressor activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
BP GO:0007021 tubulin complex assembly IEP Predicted GO
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
CC GO:0008250 oligosaccharyltransferase complex IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
CC GO:0034998 oligosaccharyltransferase I complex IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
MF GO:0048487 beta-tubulin binding IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 12 35
IPR002048 EF_hand_dom 63 126
IPR002048 EF_hand_dom 36 55
No external refs found!