Solyc05g046290

Description : Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** K4C0W2_SOLLC)

Gene families : OG_42_0000032 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc05g046290
Cluster	HCCA clusters: Cluster_44

Target	Alias	Description	ECC score	Gene Family Method
98543	No alias	xyloglucan endotransglucosylase/hydrolase 5	0.02	Orthogroups_2024-Update
AC210669.3_FG001	No alias	Xyloglucan endotransglucosylase/hydrolase family protein	0.03	Orthogroups_2024-Update
At5g57540	No alias	Putative xyloglucan endotransglucosylase/hydrolase...	0.03	Orthogroups_2024-Update
Bradi1g33827	No alias	xyloglucan endotransglycosylase 6	0.02	Orthogroups_2024-Update
Brara.H02756.1	No alias	EC_2.4 glycosyltransferase	0.02	Orthogroups_2024-Update
Glyma.13G095200	No alias	xyloglucan endotransglycosylase 6	0.03	Orthogroups_2024-Update
MA_328340g0010	No alias	(at4g03210 : 285.0) encodes a member of xyloglucan...	0.03	Orthogroups_2024-Update
PSME_00011813-RA	No alias	(at5g57560 : 322.0) Encodes a cell wall-modifying...	0.03	Orthogroups_2024-Update
Potri.005G201200	No alias	xyloglucan endotransglucosylase/hydrolase 15	0.02	Orthogroups_2024-Update
Pp1s168_54V6	No alias	xyloglucan endotransglucosylase hydrolase protein a	0.02	Orthogroups_2024-Update
Pp1s309_38V6	No alias	xyloglucan endotransglycosylase	0.02	Orthogroups_2024-Update
Solyc03g093080	No alias	Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc03g093120	No alias	xyloglucan endotransglucosylase-hydrolase	0.03	Orthogroups_2024-Update
Solyc03g093130	No alias	xyloglucan endotransglucosylase-hydrolase 3	0.03	Orthogroups_2024-Update
Solyc07g006870	No alias	Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc07g056000	No alias	xyloglycan endo-transglycosylase	0.03	Orthogroups_2024-Update
Solyc12g007250	No alias	Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Sopen02g036490	No alias	Glycosyl hydrolases family 16	0.02	Orthogroups_2024-Update
Sopen03g023920	No alias	Glycosyl hydrolases family 16	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005618	cell wall	IEA	InterProScan predictions
BP	GO:0005975	carbohydrate metabolic process	IEA	InterProScan predictions
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEA	InterProScan predictions
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
CC	GO:0048046	apoplast	IEA	InterProScan predictions
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0002161	aminoacyl-tRNA editing activity	IEP	Predicted GO
MF	GO:0003747	translation release factor activity	IEP	Predicted GO
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Predicted GO
MF	GO:0005088	Ras guanyl-nucleotide exchange factor activity	IEP	Predicted GO
MF	GO:0005089	Rho guanyl-nucleotide exchange factor activity	IEP	Predicted GO
MF	GO:0005215	transporter activity	IEP	Predicted GO
BP	GO:0006415	translational termination	IEP	Predicted GO
MF	GO:0008079	translation termination factor activity	IEP	Predicted GO
CC	GO:0016021	integral component of membrane	IEP	Predicted GO
MF	GO:0016149	translation release factor activity, codon specific	IEP	Predicted GO
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Predicted GO
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Predicted GO
MF	GO:0017016	Ras GTPase binding	IEP	Predicted GO
MF	GO:0017048	Rho GTPase binding	IEP	Predicted GO
BP	GO:0022411	cellular component disassembly	IEP	Predicted GO
CC	GO:0031224	intrinsic component of membrane	IEP	Predicted GO
MF	GO:0031267	small GTPase binding	IEP	Predicted GO
BP	GO:0032984	protein-containing complex disassembly	IEP	Predicted GO
BP	GO:0043624	cellular protein complex disassembly	IEP	Predicted GO
CC	GO:0044425	membrane part	IEP	Predicted GO
MF	GO:0051020	GTPase binding	IEP	Predicted GO
MF	GO:0051499	D-aminoacyl-tRNA deacylase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR010713	XET_C	241	285
IPR000757	GH16	31	211

External Links

No external refs found!

Solyc05g046290

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation