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  5. Solyc01g006540

Solyc01g006540


Description : lipoxygenase C


Gene families : OG_42_0000116 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000116_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g006540
Cluster HCCA clusters: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
437605 No alias lipoxygenase 3 0.02 Orthogroups_2024-Update
441081 No alias PLAT/LH2 domain-containing lipoxygenase family protein 0.04 Orthogroups_2024-Update
A4A49_32174 No alias linoleate 13s-lipoxygenase 3-1, chloroplastic 0.04 Orthogroups_2024-Update
At1g72520 No alias Lipoxygenase 4, chloroplastic... 0.04 Orthogroups_2024-Update
Bradi1g11680 No alias lipoxygenase 1 0.05 Orthogroups_2024-Update
Bradi1g72690 No alias PLAT/LH2 domain-containing lipoxygenase family protein 0.04 Orthogroups_2024-Update
Bradi3g07010 No alias lipoxygenase 2 0.06 Orthogroups_2024-Update
Bradi3g59710 No alias PLAT/LH2 domain-containing lipoxygenase family protein 0.02 Orthogroups_2024-Update
Brara.G01999.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.04 Orthogroups_2024-Update
Brara.I04828.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.04 Orthogroups_2024-Update
GRMZM2G104843 No alias lipoxygenase 3 0.02 Orthogroups_2024-Update
GRMZM2G109130 No alias lipoxygenase 1 0.02 Orthogroups_2024-Update
Glyma.08G189600 No alias lipoxygenase 1 0.05 Orthogroups_2024-Update
Glyma.10G249100 No alias PLAT/LH2 domain-containing lipoxygenase family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G115960.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
HORVU2Hr1G115980.2 No alias EC_1.13 oxidoreductase acting on single donor with... 0.04 Orthogroups_2024-Update
HORVU4Hr1G076570.6 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.03 Orthogroups_2024-Update
HORVU7Hr1G050670.1 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_10427506g0010 No alias (at1g55020 : 939.0) lipoxygenase, a defense gene... 0.02 Orthogroups_2024-Update
MA_10429541g0010 No alias (at1g72520 : 993.0) PLAT/LH2 domain-containing... 0.02 Orthogroups_2024-Update
MA_10430462g0010 No alias (at3g22400 : 148.0) LOX5; FUNCTIONS IN: oxidoreductase... 0.04 Orthogroups_2024-Update
MA_10436100g0010 No alias (p37831|lox1_soltu : 887.0) Lipoxygenase 1 (EC... 0.02 Orthogroups_2024-Update
Mp2g23380.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.13... 0.02 Orthogroups_2024-Update
PSME_00002208-RA No alias (at1g55020 : 779.0) lipoxygenase, a defense gene... 0.02 Orthogroups_2024-Update
PSME_00005109-RA No alias (p37831|lox1_soltu : 802.0) Lipoxygenase 1 (EC... 0.04 Orthogroups_2024-Update
PSME_00006847-RA No alias (at1g55020 : 964.0) lipoxygenase, a defense gene... 0.04 Orthogroups_2024-Update
PSME_00006851-RA No alias (p37831|lox1_soltu : 962.0) Lipoxygenase 1 (EC... 0.04 Orthogroups_2024-Update
PSME_00017953-RA No alias (p37831|lox1_soltu : 1048.0) Lipoxygenase 1 (EC... 0.04 Orthogroups_2024-Update
PSME_00020895-RA No alias (p37831|lox1_soltu : 805.0) Lipoxygenase 1 (EC... 0.03 Orthogroups_2024-Update
PSME_00024452-RA No alias (p37831|lox1_soltu : 840.0) Lipoxygenase 1 (EC... 0.03 Orthogroups_2024-Update
PSME_00034513-RA No alias (p37831|lox1_soltu : 809.0) Lipoxygenase 1 (EC... 0.04 Orthogroups_2024-Update
PSME_00035873-RA No alias (at1g17420 : 1123.0) Lipoxygenase; lipoxygenase 3... 0.04 Orthogroups_2024-Update
PSME_00048663-RA No alias (at1g55020 : 448.0) lipoxygenase, a defense gene... 0.03 Orthogroups_2024-Update
Seita.5G411700.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Seita.9G127700.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Sobic.001G125700.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.04 Orthogroups_2024-Update
Sobic.001G125900.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.04 Orthogroups_2024-Update
Sobic.001G483400.1 No alias 13-lipoxygenase *(LOX) & EC_1.13 oxidoreductase acting... 0.04 Orthogroups_2024-Update
Sobic.003G385500.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.08 Orthogroups_2024-Update
Sobic.003G385900.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.05 Orthogroups_2024-Update
Sobic.006G248300.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.07 Orthogroups_2024-Update
Sobic.008G191000.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Solyc09g075860 No alias Lipoxygenase (AHRD V3.3 *** A0A0V0IV70_SOLCH) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA InterProScan predictions
MF GO:0046872 metal ion binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0004312 fatty acid synthase activity IEP Predicted GO
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001024 PLAT/LH2_dom 132 196
IPR013819 LipOase_C 210 544
No external refs found!