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  5. evm.model.tig00021489.3

evm.model.tig00021489.3


Description : (at3g21090 : 172.0) ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to karrikin; LOCATED IN: membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT1G51500.1); Has 380370 Blast hits to 349027 proteins in 4089 species: Archae - 6846; Bacteria - 303738; Metazoa - 8409; Fungi - 6671; Plants - 5430; Viruses - 12; Other Eukaryotes - 49264 (source: NCBI BLink). & (q7fmw4|pdr15_orysa : 151.0) Pleiotropic drug resistance protein 15 - Oryza sativa (Rice) & (reliability: 344.0) & (original description: no original description)


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00021489.3
Cluster HCCA clusters: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
173584 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
417266 No alias pleiotropic drug resistance 12 0.01 Orthogroups_2024-Update
424639 No alias pleiotropic drug resistance 11 0.01 Orthogroups_2024-Update
429390 No alias pleiotropic drug resistance 12 0.01 Orthogroups_2024-Update
At2g37280 No alias pleiotropic drug resistance 5 [Source:TAIR;Acc:AT2G37280] 0.01 Orthogroups_2024-Update
Bradi1g35680 No alias pleiotropic drug resistance 12 0.01 Orthogroups_2024-Update
Bradi2g10110 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Bradi2g43150 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Brara.F01033.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Brara.F01034.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Brara.G02000.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Cre01.g007000 No alias pleiotropic drug resistance 3 0.03 Orthogroups_2024-Update
Cre04.g224500 No alias pleiotropic drug resistance 3 0.02 Orthogroups_2024-Update
GRMZM2G366146 No alias pleiotropic drug resistance 1 0.01 Orthogroups_2024-Update
HORVU4Hr1G081040.4 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
HORVU5Hr1G049450.2 No alias subfamily ABCG transporter 0.01 Orthogroups_2024-Update
Kfl00018_0500 kfl00018_0500_v1.1 (q8gu90|pdr3_orysa : 1455.0) Pleiotropic drug resistance... 0.02 Orthogroups_2024-Update
LOC_Os01g42410 No alias pleiotropic drug resistance protein, putative, expressed 0.01 Orthogroups_2024-Update
MA_10426781g0010 No alias (at2g36380 : 1292.0) pleiotropic drug resistance 6... 0.02 Orthogroups_2024-Update
MA_173274g0010 No alias (q5z9s8|pdr12_orysa : 429.0) Pleiotropic drug resistance... 0.01 Orthogroups_2024-Update
PSME_00000869-RA No alias (q5z9s8|pdr12_orysa : 1879.0) Pleiotropic drug... 0.02 Orthogroups_2024-Update
PSME_00001267-RA No alias (q5z9s8|pdr12_orysa : 1556.0) Pleiotropic drug... 0.01 Orthogroups_2024-Update
PSME_00009473-RA No alias (at2g26910 : 1773.0) pleiotropic drug resistance 4... 0.01 Orthogroups_2024-Update
PSME_00010410-RA No alias (q8gu88|pdr7_orysa : 1693.0) Putative pleiotropic drug... 0.01 Orthogroups_2024-Update
PSME_00012870-RA No alias (q76cu2|pdr1_tobac : 1718.0) Pleiotropic drug resistance... 0.01 Orthogroups_2024-Update
PSME_00015395-RA No alias (q76cu2|pdr1_tobac : 1904.0) Pleiotropic drug resistance... 0.02 Orthogroups_2024-Update
Pp1s59_42V6 No alias atp-binding cassette 0.01 Orthogroups_2024-Update
Seita.9G001100.1 No alias subfamily ABCG transporter 0.01 Orthogroups_2024-Update
Sobic.003G215800.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Sobic.003G216166.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Sobic.003G216232.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Sobic.006G114100.4 No alias subfamily ABCG transporter 0.01 Orthogroups_2024-Update
Solyc03g120980 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc11g007290 No alias No description available 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0004565 beta-galactosidase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
CC GO:0009341 beta-galactosidase complex IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
MF GO:0015925 galactosidase activity IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 537 697
IPR013525 ABC_2_trans 1125 1327
No external refs found!