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  5. Solyc05g047620

Solyc05g047620


Description : LOW QUALITY:Movement protein (AHRD V3.3 *-* A0A151UGG0_CAJCA)


Gene families : OG_42_0001386 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001386_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g047620
Cluster HCCA clusters: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
Solyc12g019370 No alias LOW QUALITY:Movement protein (AHRD V3.3 *-* A0A151UGG0_CAJCA) 0.03 Orthogroups_2024-Update
Sopen02g001730 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Sopen02g004470 No alias Viral movement protein (MP) 0.04 Orthogroups_2024-Update
Sopen03g018570 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen07g010890 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen11g016230 No alias hypothetical protein 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR028919 Viral_movement 43 225
No external refs found!