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  5. Solyc05g050130

Solyc05g050130


Description : Acidic endochitinase (AHRD V3.3 *** CHIA_TOBAC)


Gene families : OG_42_0000663 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000663_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g050130
Cluster HCCA clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
126203 No alias chitinase A 0.02 Orthogroups_2024-Update
Glyma.08G299700 No alias chitinase A 0.03 Orthogroups_2024-Update
Glyma.10G227700 No alias chitinase A 0.04 Orthogroups_2024-Update
Kfl00054_0100 kfl00054_0100_v1.1 (p36910|chie_betvu : 220.0) Acidic endochitinase SE2... 0.02 Orthogroups_2024-Update
LOC_Os01g47070 No alias glycosyl hydrolase, putative, expressed 0.04 Orthogroups_2024-Update
Potri.015G024200 No alias chitinase A 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004017 adenylate kinase activity IEP Predicted GO
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
MF GO:0050145 nucleoside monophosphate kinase activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 26 244
No external refs found!