1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc05g050230

Solyc05g050230


Description : Ubiquitin conjugating enzyme E2 (AHRD V3.3 *** A5YVL3_ADICA)


Gene families : OG_42_0000236 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g050230
Cluster HCCA clusters: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
6339 No alias ubiquitin-conjugating enzyme 37 0.02 Orthogroups_2024-Update
Bradi2g45550 No alias ubiquitin conjugating enzyme 9 0.03 Orthogroups_2024-Update
Bradi2g53430 No alias ubiquitin-conjugating enzyme 11 0.02 Orthogroups_2024-Update
Brara.B01288.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.03 Orthogroups_2024-Update
Brara.C01271.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.03 Orthogroups_2024-Update
Brara.G00309.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.05 Orthogroups_2024-Update
Brara.J01050.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.03 Orthogroups_2024-Update
GRMZM2G000601 No alias ubiquitin-conjugating enzyme 28 0.03 Orthogroups_2024-Update
GRMZM2G132759 No alias ubiquitin-conjugating enzyme 11 0.03 Orthogroups_2024-Update
GRMZM5G814314 No alias ubiquitin conjugating enzyme 9 0.06 Orthogroups_2024-Update
LOC_Os02g02830 No alias ubiquitin-conjugating enzyme, putative, expressed 0.02 Orthogroups_2024-Update
Potri.006G110200 No alias ubiquitin conjugating enzyme 8 0.03 Orthogroups_2024-Update
Potri.012G033000 No alias ubiquitin-conjugating enzyme 10 0.03 Orthogroups_2024-Update
Pp1s319_37V6 No alias ubiquitin-conjugating enzyme 0.02 Orthogroups_2024-Update
Pp1s69_31V6 No alias ubiquitin conjugating enzyme 0.03 Orthogroups_2024-Update
Seita.4G164400.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.04 Orthogroups_2024-Update
Seita.5G250800.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.04 Orthogroups_2024-Update
Sobic.003G243600.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.06 Orthogroups_2024-Update
Sobic.003G337000.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.03 Orthogroups_2024-Update
Sobic.004G017800.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.04 Orthogroups_2024-Update
Sobic.006G257900.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.03 Orthogroups_2024-Update
Sopen05g028680 No alias Ubiquitin-conjugating enzyme 0.2 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0016987 sigma factor activity IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051205 protein insertion into membrane IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 5 141
No external refs found!