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  5. Solyc05g050260

Solyc05g050260


No description available


Gene families : OG_42_0000008 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g050260

Target Alias Description ECC score Gene Family Method Actions
HORVU5Hr1G106200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Kfl01633_0020 kfl01633_0020_v1.1 (original description: no original description) 0.02 Orthogroups_2024-Update
LOC_Os01g52000 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g49790 No alias retrotransposon protein, putative, Ty1-copia subclass, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g29490 No alias retrotransposon protein, putative, unclassified 0.02 Orthogroups_2024-Update
Potri.009G166500 No alias Function unknown 0.03 Orthogroups_2024-Update
Pp1s249_4V6 No alias No description available 0.03 Orthogroups_2024-Update
Solyc02g062480 No alias No description available 0.03 Orthogroups_2024-Update
Solyc04g011970 No alias No description available 0.02 Orthogroups_2024-Update
Solyc08g061870 No alias No description available 0.03 Orthogroups_2024-Update
Solyc08g062410 No alias No description available 0.03 Orthogroups_2024-Update
Solyc11g051150 No alias No description available 0.04 Orthogroups_2024-Update
Sopen01g006590 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen01g011350 No alias Domain of unknown function (DUF4219) 0.03 Orthogroups_2024-Update
Sopen01g027290 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.04 Orthogroups_2024-Update
Sopen01g027300 No alias Integrase core domain 0.03 Orthogroups_2024-Update
Sopen02g005350 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen02g020410 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.04 Orthogroups_2024-Update
Sopen04g009050 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.04 Orthogroups_2024-Update
Sopen04g011060 No alias gag-polypeptide of LTR copia-type 0.03 Orthogroups_2024-Update
Sopen04g023600 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.04 Orthogroups_2024-Update
Sopen05g009400 No alias gag-polypeptide of LTR copia-type 0.03 Orthogroups_2024-Update
Sopen05g013410 No alias Integrase core domain 0.04 Orthogroups_2024-Update
Sopen05g015450 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen05g019080 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen05g022390 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.04 Orthogroups_2024-Update
Sopen06g011320 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.04 Orthogroups_2024-Update
Sopen07g023540 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen08g011210 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen09g011980 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.04 Orthogroups_2024-Update
Sopen12g022840 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!