evm.model.tig00021612.44


Description : no hits & (original description: no original description)


Gene families : OG_42_0004029 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004029_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00021612.44
Cluster HCCA clusters: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
A4A49_33067 No alias nuclear pore complex protein nup50b 0.01 Orthogroups_2024-Update
Brara.E01582.1 No alias nucleoporin of nuclear pore complex *(NUP50) 0.02 Orthogroups_2024-Update
HORVU1Hr1G059860.2 No alias nucleoporin of nuclear pore complex *(NUP50) 0.02 Orthogroups_2024-Update
Solyc03g120280 No alias Ran-binding protein 1 domain-containing (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen03g039170 No alias NUP50 (Nucleoporin 50 kDa) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA InterProScan predictions
BP GO:0046907 intracellular transport IEA InterProScan predictions
Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
MF GO:0000149 SNARE binding IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0005047 signal recognition particle binding IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0005785 signal recognition particle receptor complex IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
MF GO:0019905 syntaxin binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
CC GO:0030896 checkpoint clamp complex IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000156 Ran_bind_dom 263 379
IPR015007 NUP2/50/61 3 67
No external refs found!