Solyc05g051200

Description : ethylene-responsive factor 1

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc05g051200
Cluster	HCCA clusters: Cluster_233

Target	Alias	Description	ECC score	Gene Family Method
A4A49_06467	No alias	ethylene-responsive transcription factor crf4	0.02	Orthogroups_2024-Update
A4A49_15668	No alias	ethylene-responsive transcription factor rap2-12	0.03	Orthogroups_2024-Update
A4A49_21212	No alias	ethylene-responsive transcription factor erf008	0.02	Orthogroups_2024-Update
A4A49_25134	No alias	ethylene-responsive transcription factor 1b	0.05	Orthogroups_2024-Update
A4A49_33000	No alias	ethylene-responsive transcription factor 14	0.03	Orthogroups_2024-Update
A4A49_38093	No alias	ethylene-responsive transcription factor erf034	0.02	Orthogroups_2024-Update
At3g23240	No alias	Ethylene-responsive transcription factor 1B...	0.04	Orthogroups_2024-Update
At4g16750	No alias	Ethylene-responsive transcription factor ERF039...	0.03	Orthogroups_2024-Update
At5g18450	No alias	Dehydration-responsive element-binding protein 2G...	0.03	Orthogroups_2024-Update
At5g25190	No alias	Ethylene-responsive transcription factor ERF003...	0.04	Orthogroups_2024-Update
Bradi3g24000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi5g24110	No alias	related to AP2 10	0.02	Orthogroups_2024-Update
Brara.C04274.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.H00430.1	No alias	subgroup ERF-II-DEAR transcription factor	0.05	Orthogroups_2024-Update
Brara.I05089.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Brara.J00210.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Brara.J02251.1	No alias	cutin and suberin biosynthesis transcription factor...	0.04	Orthogroups_2024-Update
Brara.K00687.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.K01031.1	No alias	subgroup ERF-II-DEAR transcription factor	0.03	Orthogroups_2024-Update
GRMZM5G837876	No alias	ethylene-responsive element binding factor 15	0.03	Orthogroups_2024-Update
Glyma.14G050100	No alias	ethylene responsive element binding factor 3	0.04	Orthogroups_2024-Update
Glyma.18G144700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
HORVU6Hr1G074970.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
LOC_Os02g51670	No alias	ethylene-responsive transcription factor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g03670	No alias	dehydration-responsive element-binding protein,...	0.02	Orthogroups_2024-Update
LOC_Os08g35240	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_436575g0010	No alias	no hits & (original description: no original description)	0.04	Orthogroups_2024-Update
PSME_00004941-RA	No alias	(at4g17500 : 94.7) Encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
PSME_00005186-RA	No alias	(at4g17500 : 141.0) Encodes a member of the ERF...	0.03	Orthogroups_2024-Update
Potri.002G141200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.003G054400	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.003G162500	No alias	related to AP2 6l	0.03	Orthogroups_2024-Update
Potri.006G069400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.010G046600	No alias	DORNROSCHEN-like	0.03	Orthogroups_2024-Update
Potri.014G055700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Pp1s138_190V6	No alias	ap2 erf domain-containing transcription factor	0.03	Orthogroups_2024-Update
Pp1s155_21V6	No alias	transcriptional factor	0.03	Orthogroups_2024-Update
Pp1s15_186V6	No alias	transcriptional factor	0.03	Orthogroups_2024-Update
Pp1s2_410V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.1G027100.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Seita.1G257600.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Seita.1G270800.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.3G031600.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Seita.4G180800.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Seita.6G235100.1	No alias	Unknown function	0.05	Orthogroups_2024-Update
Seita.7G290600.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Seita.9G320700.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.004G297100.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.006G168000.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.008G050600.2	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Solyc05g052030	No alias	ethylene response factor 4	0.04	Orthogroups_2024-Update
Solyc09g066360	No alias	Ethylene Response Factor C.3	0.03	Orthogroups_2024-Update
Sopen05g030580	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen09g028070	No alias	AP2 domain	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Predicted GO
BP	GO:0006090	pyruvate metabolic process	IEP	Predicted GO
BP	GO:0006812	cation transport	IEP	Predicted GO
BP	GO:0008654	phospholipid biosynthetic process	IEP	Predicted GO
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	IEP	Predicted GO
MF	GO:0010333	terpene synthase activity	IEP	Predicted GO
BP	GO:0015985	energy coupled proton transport, down electrochemical gradient	IEP	Predicted GO
BP	GO:0015986	ATP synthesis coupled proton transport	IEP	Predicted GO
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Predicted GO
MF	GO:0016726	oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor	IEP	Predicted GO
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Predicted GO
MF	GO:0016854	racemase and epimerase activity	IEP	Predicted GO
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	Predicted GO
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEP	Predicted GO
BP	GO:0019637	organophosphate metabolic process	IEP	Predicted GO
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Predicted GO
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Predicted GO
MF	GO:0043167	ion binding	IEP	Predicted GO
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Predicted GO
BP	GO:0046490	isopentenyl diphosphate metabolic process	IEP	Predicted GO
BP	GO:0050992	dimethylallyl diphosphate biosynthetic process	IEP	Predicted GO
BP	GO:0050993	dimethylallyl diphosphate metabolic process	IEP	Predicted GO
MF	GO:0051745	4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity	IEP	Predicted GO
BP	GO:0090407	organophosphate biosynthetic process	IEP	Predicted GO
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	96	146

External Links

No external refs found!

Solyc05g051200

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation