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  5. Solyc05g051550

Solyc05g051550


Description : MYB-related transcription factor (AHRD V3.3 *** A0A059PRU0_SALMI)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g051550
Cluster HCCA clusters: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
39499 No alias myb domain protein 13 0.02 Orthogroups_2024-Update
A4A49_01152 No alias transcription factor myb36 0.03 Orthogroups_2024-Update
A4A49_16262 No alias transcription factor myb39 0.03 Orthogroups_2024-Update
A4A49_35836 No alias transcription factor myb30 0.03 Orthogroups_2024-Update
At1g25340 No alias myb domain protein 116 [Source:TAIR;Acc:AT1G25340] 0.03 Orthogroups_2024-Update
At3g01140 No alias Myb domain protein 106 [Source:UniProtKB/TrEMBL;Acc:F4J2A8] 0.03 Orthogroups_2024-Update
At4g28110 No alias MYB41 [Source:UniProtKB/TrEMBL;Acc:A0A178V452] 0.03 Orthogroups_2024-Update
At5g56110 No alias MYB80 [Source:UniProtKB/TrEMBL;Acc:A0A178UM75] 0.03 Orthogroups_2024-Update
At5g57620 No alias Transcription factor MYB36... 0.03 Orthogroups_2024-Update
Bradi4g30220 No alias myb domain protein 94 0.02 Orthogroups_2024-Update
Bradi4g36460 No alias myb domain protein 4 0.04 Orthogroups_2024-Update
Bradi4g38965 No alias myb domain protein 36 0.02 Orthogroups_2024-Update
Brara.A00330.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Brara.I00496.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Brara.I05267.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Brara.J02324.1 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.03 Orthogroups_2024-Update
Brara.K01188.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G050305 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
GRMZM2G162434 No alias myb domain protein 60 0.03 Orthogroups_2024-Update
Glyma.07G092800 No alias myb domain protein 62 0.03 Orthogroups_2024-Update
Glyma.07G235900 No alias myb domain protein 108 0.03 Orthogroups_2024-Update
Glyma.08G317800 No alias myb domain protein 97 0.02 Orthogroups_2024-Update
Glyma.09G206200 No alias myb domain protein 39 0.03 Orthogroups_2024-Update
Glyma.10G273000 No alias myb domain protein 62 0.04 Orthogroups_2024-Update
Glyma.12G057900 No alias myb domain protein 83 0.03 Orthogroups_2024-Update
Glyma.16G073000 No alias myb domain protein 21 0.03 Orthogroups_2024-Update
Glyma.17G065800 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Glyma.19G219000 No alias myb domain protein 112 0.03 Orthogroups_2024-Update
Glyma.19G257400 No alias myb domain protein 4 0.03 Orthogroups_2024-Update
HORVU0Hr1G005100.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
HORVU1Hr1G079040.4 No alias MYB class-R2R3 subgroup-13 transcription factor & CLE... 0.02 Orthogroups_2024-Update
HORVU6Hr1G058580.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os01g36460 No alias MYB family transcription factor, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os01g59660 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g42870 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g35500 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g46610 No alias myb-like DNA-binding domain containing protein,... 0.03 Orthogroups_2024-Update
LOC_Os05g48010 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g33810 No alias myb-related protein Myb4, putative, expressed 0.02 Orthogroups_2024-Update
MA_10435612g0010 No alias (at5g15310 : 300.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
MA_137934g0010 No alias (at3g23250 : 215.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
MA_37058g0010 No alias (at5g35550 : 158.0) TT2 encodes a R2R3 MYB domain... 0.03 Orthogroups_2024-Update
MA_37851g0010 No alias (at3g08500 : 182.0) Encodes a putative R2R3-type MYB... 0.03 Orthogroups_2024-Update
MA_8356281g0010 No alias (at3g13540 : 224.0) Encodes a member of the MYB family... 0.04 Orthogroups_2024-Update
MA_94467g0010 No alias (at3g13540 : 228.0) Encodes a member of the MYB family... 0.03 Orthogroups_2024-Update
PSME_00014640-RA No alias (at3g27810 : 179.0) Encodes a member of the R2R3-MYB... 0.03 Orthogroups_2024-Update
PSME_00018495-RA No alias (at3g02940 : 176.0) Encodes a putative transcription... 0.02 Orthogroups_2024-Update
PSME_00050915-RA No alias (at1g74650 : 283.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
PSME_00051072-RA No alias (at4g34990 : 160.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00051224-RA No alias (at5g15310 : 212.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
Potri.003G079100 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
Potri.006G123400 No alias myb domain protein 36 0.03 Orthogroups_2024-Update
Potri.006G221200 No alias myb domain protein 5 0.03 Orthogroups_2024-Update
Potri.012G080400 No alias myb domain protein 66 0.03 Orthogroups_2024-Update
Potri.013G149200 No alias myb domain protein 14 0.03 Orthogroups_2024-Update
Pp1s204_13V6 No alias MDA7.17; myb family transcription factor [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s61_196V6 No alias myb transcription factor myb92 0.02 Orthogroups_2024-Update
Seita.1G117000.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.02 Orthogroups_2024-Update
Seita.2G199800.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Seita.2G289900.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Seita.2G351400.1 No alias MYB class-R2R3 subgroup-11 transcription factor 0.02 Orthogroups_2024-Update
Seita.7G167300.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Seita.7G179600.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.02 Orthogroups_2024-Update
Sobic.002G423300.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G216900.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Sobic.006G115200.1 No alias transcriptional regulator *(MS188) & transcriptional... 0.03 Orthogroups_2024-Update
Sobic.008G187001.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.02 Orthogroups_2024-Update
Sobic.010G106601.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Solyc06g073640 No alias GAMYB-like2 0.04 Orthogroups_2024-Update
Solyc10g005760 No alias R2R3MYB transcription factor 80 0.03 Orthogroups_2024-Update
Sopen03g001570 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen03g004680 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen03g031480 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen10g025190 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
MF GO:0005048 signal sequence binding IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006621 protein retention in ER lumen IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0032507 maintenance of protein location in cell IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Predicted GO
MF GO:0042277 peptide binding IEP Predicted GO
BP GO:0045185 maintenance of protein location IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
MF GO:0046923 ER retention sequence binding IEP Predicted GO
BP GO:0051235 maintenance of location IEP Predicted GO
BP GO:0051651 maintenance of location in cell IEP Predicted GO
CC GO:0070461 SAGA-type complex IEP Predicted GO
BP GO:0072595 maintenance of protein localization in organelle IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 112
IPR001005 SANT/Myb 14 61
No external refs found!